Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-1P78426 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-1P78426 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-1P78426 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
NKX6-1P78426 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-1P78426 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-1P78426 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.34■□□□□ 0.37
NKX6-1P78426 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NKX6-1P78426 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.34■□□□□ 0.37
NKX6-1P78426 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NKX6-1P78426 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NKX6-1P78426 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-1P78426 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.34■□□□□ 0.37
NKX6-1P78426 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.34■□□□□ 0.37
NKX6-1P78426 AC110285.5-201ENST00000611501 352 ntBASIC17.34■□□□□ 0.37
NKX6-1P78426 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NKX6-1P78426 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-1P78426 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
NKX6-1P78426 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NKX6-1P78426 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX6-1P78426 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.33■□□□□ 0.37
NKX6-1P78426 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NKX6-1P78426 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX6-1P78426 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NKX6-1P78426 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX6-1P78426 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.33■□□□□ 0.37
NKX6-1P78426 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.33■□□□□ 0.37
NKX6-1P78426 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NKX6-1P78426 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-1P78426 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-1P78426 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.33■□□□□ 0.36
NKX6-1P78426 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-1P78426 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-1P78426 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.33■□□□□ 0.36
NKX6-1P78426 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.33■□□□□ 0.36
NKX6-1P78426 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-1P78426 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.33■□□□□ 0.36
NKX6-1P78426 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-1P78426 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.33■□□□□ 0.36
NKX6-1P78426 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.33■□□□□ 0.36
NKX6-1P78426 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.33■□□□□ 0.36
NKX6-1P78426 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-1P78426 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.33■□□□□ 0.36
NKX6-1P78426 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-1P78426 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NKX6-1P78426 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 PTBP1P-201ENST00000554374 1601 ntBASIC17.32■□□□□ 0.36
NKX6-1P78426 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.32■□□□□ 0.36
NKX6-1P78426 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.32■□□□□ 0.36
NKX6-1P78426 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.32■□□□□ 0.36
NKX6-1P78426 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NKX6-1P78426 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NKX6-1P78426 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.32■□□□□ 0.36
NKX6-1P78426 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.32■□□□□ 0.36
NKX6-1P78426 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.32■□□□□ 0.36
NKX6-1P78426 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.32■□□□□ 0.36
NKX6-1P78426 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-1P78426 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.32■□□□□ 0.36
NKX6-1P78426 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NKX6-1P78426 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX6-1P78426 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NKX6-1P78426 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NKX6-1P78426 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NKX6-1P78426 KRASP1-201ENST00000407852 552 ntBASIC17.31■□□□□ 0.36
NKX6-1P78426 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.31■□□□□ 0.36
NKX6-1P78426 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX6-1P78426 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.31■□□□□ 0.36
NKX6-1P78426 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 AC120498.8-201ENST00000614275 531 ntBASIC17.31■□□□□ 0.36
NKX6-1P78426 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.31■□□□□ 0.36
NKX6-1P78426 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-1P78426 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
NKX6-1P78426 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NKX6-1P78426 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-1P78426 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.3■□□□□ 0.36
NKX6-1P78426 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms