Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.23■□□□□ 0.67
YBX1P67809 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.23■□□□□ 0.67
YBX1P67809 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.23■□□□□ 0.67
YBX1P67809 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.23■□□□□ 0.67
YBX1P67809 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
YBX1P67809 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.23■□□□□ 0.67
YBX1P67809 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.23■□□□□ 0.67
YBX1P67809 ESRRAP1-201ENST00000400596 1257 ntBASIC19.23■□□□□ 0.67
YBX1P67809 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.23■□□□□ 0.67
YBX1P67809 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.23■□□□□ 0.67
YBX1P67809 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.23■□□□□ 0.67
YBX1P67809 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
YBX1P67809 AC233263.1-201ENST00000578059 224 ntBASIC19.23■□□□□ 0.67
YBX1P67809 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.23■□□□□ 0.67
YBX1P67809 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
YBX1P67809 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.23■□□□□ 0.67
YBX1P67809 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
YBX1P67809 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
YBX1P67809 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.23■□□□□ 0.67
YBX1P67809 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.22■□□□□ 0.67
YBX1P67809 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YBX1P67809 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
YBX1P67809 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YBX1P67809 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YBX1P67809 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
YBX1P67809 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
YBX1P67809 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.22■□□□□ 0.67
YBX1P67809 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.22■□□□□ 0.67
YBX1P67809 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.22■□□□□ 0.67
YBX1P67809 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
YBX1P67809 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
YBX1P67809 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.22■□□□□ 0.67
YBX1P67809 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
YBX1P67809 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
YBX1P67809 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
YBX1P67809 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
YBX1P67809 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YBX1P67809 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
YBX1P67809 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
YBX1P67809 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.22■□□□□ 0.67
YBX1P67809 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
YBX1P67809 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 AC018445.3-201ENST00000624177 1945 ntBASIC19.21■□□□□ 0.67
YBX1P67809 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.21■□□□□ 0.67
YBX1P67809 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.21■□□□□ 0.67
YBX1P67809 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 AL390719.1-204ENST00000412397 1219 ntBASIC19.21■□□□□ 0.67
YBX1P67809 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.21■□□□□ 0.67
YBX1P67809 AP003097.1-201ENST00000530657 1135 ntBASIC19.21■□□□□ 0.67
YBX1P67809 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.21■□□□□ 0.67
YBX1P67809 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.21■□□□□ 0.67
YBX1P67809 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 AP000974.1-201ENST00000623909 2387 ntBASIC19.21■□□□□ 0.67
YBX1P67809 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
YBX1P67809 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.21■□□□□ 0.67
YBX1P67809 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
YBX1P67809 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
YBX1P67809 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
YBX1P67809 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 HLA-G-202ENST00000376815 851 ntBASIC19.2■□□□□ 0.66
YBX1P67809 HLA-G-203ENST00000376818 1127 ntBASIC19.2■□□□□ 0.66
YBX1P67809 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
YBX1P67809 AC026366.1-201ENST00000488803 879 ntBASIC19.2■□□□□ 0.66
YBX1P67809 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.2■□□□□ 0.66
YBX1P67809 AC008687.6-201ENST00000596318 630 ntBASIC19.2■□□□□ 0.66
YBX1P67809 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.2■□□□□ 0.66
YBX1P67809 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.2■□□□□ 0.66
YBX1P67809 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.2■□□□□ 0.66
YBX1P67809 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.2■□□□□ 0.66
YBX1P67809 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
YBX1P67809 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
YBX1P67809 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms