Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.33■□□□□ 0.84
EIF3EP60228 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.32■□□□□ 0.84
EIF3EP60228 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.32■□□□□ 0.84
EIF3EP60228 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.32■□□□□ 0.84
EIF3EP60228 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
EIF3EP60228 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
EIF3EP60228 MIPEPP3-201ENST00000412105 444 ntBASIC20.32■□□□□ 0.84
EIF3EP60228 AC006970.2-201ENST00000450065 779 ntBASIC20.32■□□□□ 0.84
EIF3EP60228 AC083906.2-201ENST00000511578 360 ntBASIC20.32■□□□□ 0.84
EIF3EP60228 AL121832.2-201ENST00000610979 668 ntBASIC20.32■□□□□ 0.84
EIF3EP60228 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.32■□□□□ 0.84
EIF3EP60228 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.32■□□□□ 0.84
EIF3EP60228 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
EIF3EP60228 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
EIF3EP60228 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
EIF3EP60228 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
EIF3EP60228 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
EIF3EP60228 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.31■□□□□ 0.84
EIF3EP60228 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
EIF3EP60228 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
EIF3EP60228 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.31■□□□□ 0.84
EIF3EP60228 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
EIF3EP60228 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EIF3EP60228 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3EP60228 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.3■□□□□ 0.84
EIF3EP60228 AC018553.1-201ENST00000616682 1458 ntBASIC20.3■□□□□ 0.84
EIF3EP60228 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
EIF3EP60228 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
EIF3EP60228 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
EIF3EP60228 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
EIF3EP60228 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.3■□□□□ 0.84
EIF3EP60228 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3EP60228 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.3■□□□□ 0.84
EIF3EP60228 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3EP60228 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3EP60228 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3EP60228 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
EIF3EP60228 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.3■□□□□ 0.84
EIF3EP60228 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.3■□□□□ 0.84
EIF3EP60228 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.3■□□□□ 0.84
EIF3EP60228 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.3■□□□□ 0.84
EIF3EP60228 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.3■□□□□ 0.84
EIF3EP60228 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
EIF3EP60228 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.3■□□□□ 0.84
EIF3EP60228 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
EIF3EP60228 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3EP60228 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.3■□□□□ 0.84
EIF3EP60228 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.3■□□□□ 0.84
EIF3EP60228 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
EIF3EP60228 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.3■□□□□ 0.84
EIF3EP60228 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
EIF3EP60228 AIRN-201ENST00000601203 4374 ntBASIC20.29■□□□□ 0.84
EIF3EP60228 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.29■□□□□ 0.84
EIF3EP60228 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.29■□□□□ 0.84
EIF3EP60228 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.29■□□□□ 0.84
EIF3EP60228 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.29■□□□□ 0.84
EIF3EP60228 DUSP5P2-201ENST00000426873 1033 ntBASIC20.29■□□□□ 0.84
EIF3EP60228 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.29■□□□□ 0.84
EIF3EP60228 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
EIF3EP60228 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EIF3EP60228 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
EIF3EP60228 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms