Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 AC233263.1-201ENST00000578059 224 ntBASIC21.21■□□□□ 0.99
MCCD1P59942 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MCCD1P59942 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
MCCD1P59942 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
MCCD1P59942 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
MCCD1P59942 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
MCCD1P59942 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MCCD1P59942 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MCCD1P59942 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MCCD1P59942 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.2■□□□□ 0.98
MCCD1P59942 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
MCCD1P59942 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.2■□□□□ 0.98
MCCD1P59942 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.2■□□□□ 0.98
MCCD1P59942 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.2■□□□□ 0.98
MCCD1P59942 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.2■□□□□ 0.98
MCCD1P59942 ESRRAP1-201ENST00000400596 1257 ntBASIC21.2■□□□□ 0.98
MCCD1P59942 KRT17P3-201ENST00000420566 1262 ntBASIC21.2■□□□□ 0.98
MCCD1P59942 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MCCD1P59942 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
MCCD1P59942 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.2■□□□□ 0.98
MCCD1P59942 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MCCD1P59942 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.2■□□□□ 0.98
MCCD1P59942 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.2■□□□□ 0.98
MCCD1P59942 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.2■□□□□ 0.98
MCCD1P59942 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.2■□□□□ 0.98
MCCD1P59942 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MCCD1P59942 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MCCD1P59942 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MCCD1P59942 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MCCD1P59942 Z82202.1-201ENST00000623446 1880 ntBASIC21.2■□□□□ 0.98
MCCD1P59942 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
MCCD1P59942 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MCCD1P59942 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.2■□□□□ 0.98
MCCD1P59942 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.2■□□□□ 0.98
MCCD1P59942 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MCCD1P59942 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.19■□□□□ 0.98
MCCD1P59942 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MCCD1P59942 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MCCD1P59942 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MCCD1P59942 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MCCD1P59942 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MCCD1P59942 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
MCCD1P59942 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.19■□□□□ 0.98
MCCD1P59942 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MCCD1P59942 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MCCD1P59942 KRT8P8-201ENST00000434750 1448 ntBASIC21.19■□□□□ 0.98
MCCD1P59942 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.19■□□□□ 0.98
MCCD1P59942 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MCCD1P59942 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.18■□□□□ 0.98
MCCD1P59942 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.18■□□□□ 0.98
MCCD1P59942 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21.18■□□□□ 0.98
MCCD1P59942 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.18■□□□□ 0.98
MCCD1P59942 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.18■□□□□ 0.98
MCCD1P59942 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.18■□□□□ 0.98
MCCD1P59942 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 CD99P1-205ENST00000527459 561 ntBASIC21.18■□□□□ 0.98
MCCD1P59942 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.18■□□□□ 0.98
MCCD1P59942 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.18■□□□□ 0.98
MCCD1P59942 RN7SL471P-201ENST00000580476 299 ntBASIC21.18■□□□□ 0.98
MCCD1P59942 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.18■□□□□ 0.98
MCCD1P59942 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.18■□□□□ 0.98
MCCD1P59942 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.18■□□□□ 0.98
MCCD1P59942 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.18■□□□□ 0.98
MCCD1P59942 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MCCD1P59942 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.17■□□□□ 0.98
MCCD1P59942 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MCCD1P59942 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MCCD1P59942 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MCCD1P59942 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MCCD1P59942 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
MCCD1P59942 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.17■□□□□ 0.98
MCCD1P59942 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.17■□□□□ 0.98
MCCD1P59942 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.17■□□□□ 0.98
MCCD1P59942 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.17■□□□□ 0.98
MCCD1P59942 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MCCD1P59942 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.17■□□□□ 0.98
MCCD1P59942 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.17■□□□□ 0.98
MCCD1P59942 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.17■□□□□ 0.98
MCCD1P59942 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MCCD1P59942 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MCCD1P59942 AC093484.2-201ENST00000580996 2166 ntBASIC21.17■□□□□ 0.98
MCCD1P59942 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MCCD1P59942 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MCCD1P59942 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MCCD1P59942 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MCCD1P59942 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms