Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.94■□□□□ 0.3
AP3S2P59780 AC020916.1-201ENST00000587762 1774 ntBASIC16.94■□□□□ 0.3
AP3S2P59780 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.94■□□□□ 0.3
AP3S2P59780 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
AP3S2P59780 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.93■□□□□ 0.3
AP3S2P59780 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
AP3S2P59780 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
AP3S2P59780 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
AP3S2P59780 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
AP3S2P59780 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
AP3S2P59780 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.93■□□□□ 0.3
AP3S2P59780 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC16.93■□□□□ 0.3
AP3S2P59780 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.93■□□□□ 0.3
AP3S2P59780 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
AP3S2P59780 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
AP3S2P59780 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
AP3S2P59780 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
AP3S2P59780 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
AP3S2P59780 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.93■□□□□ 0.3
AP3S2P59780 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.93■□□□□ 0.3
AP3S2P59780 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
AP3S2P59780 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
AP3S2P59780 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.93■□□□□ 0.3
AP3S2P59780 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
AP3S2P59780 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
AP3S2P59780 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
AP3S2P59780 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
AP3S2P59780 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
AP3S2P59780 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.92■□□□□ 0.3
AP3S2P59780 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.92■□□□□ 0.3
AP3S2P59780 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
AP3S2P59780 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
AP3S2P59780 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.92■□□□□ 0.3
AP3S2P59780 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AP3S2P59780 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 AC135050.7-201ENST00000624508 2218 ntBASIC16.91■□□□□ 0.3
AP3S2P59780 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.91■□□□□ 0.3
AP3S2P59780 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.91■□□□□ 0.3
AP3S2P59780 MIR3621-201ENST00000580529 85 ntBASIC16.91■□□□□ 0.3
AP3S2P59780 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
AP3S2P59780 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 AC005332.8-201ENST00000622750 2735 ntBASIC16.91■□□□□ 0.3
AP3S2P59780 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.91■□□□□ 0.3
AP3S2P59780 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.91■□□□□ 0.3
AP3S2P59780 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
AP3S2P59780 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.91■□□□□ 0.3
AP3S2P59780 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
AP3S2P59780 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
AP3S2P59780 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.9■□□□□ 0.3
AP3S2P59780 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3S2P59780 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.9■□□□□ 0.3
AP3S2P59780 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3S2P59780 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
AP3S2P59780 KRT16P2-201ENST00000414673 1423 ntBASIC16.9■□□□□ 0.3
AP3S2P59780 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP3S2P59780 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC16.9■□□□□ 0.3
AP3S2P59780 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP3S2P59780 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms