Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH11P55287 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CDH11P55287 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH11P55287 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH11P55287 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH11P55287 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH11P55287 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH11P55287 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH11P55287 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH11P55287 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH11P55287 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH11P55287 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDH11P55287 AC093787.1-201ENST00000450396 207 ntBASIC18.01■□□□□ 0.47
CDH11P55287 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.01■□□□□ 0.47
CDH11P55287 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.01■□□□□ 0.47
CDH11P55287 AC098934.4-201ENST00000564127 592 ntBASIC18.01■□□□□ 0.47
CDH11P55287 MIR4758-201ENST00000577688 71 ntBASIC18.01■□□□□ 0.47
CDH11P55287 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDH11P55287 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CDH11P55287 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDH11P55287 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH11P55287 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDH11P55287 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH11P55287 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH11P55287 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDH11P55287 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH11P55287 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.01■□□□□ 0.47
CDH11P55287 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDH11P55287 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.01■□□□□ 0.47
CDH11P55287 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18■□□□□ 0.47
CDH11P55287 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18■□□□□ 0.47
CDH11P55287 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18■□□□□ 0.47
CDH11P55287 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18■□□□□ 0.47
CDH11P55287 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
CDH11P55287 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18■□□□□ 0.47
CDH11P55287 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18■□□□□ 0.47
CDH11P55287 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CDH11P55287 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CDH11P55287 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDH11P55287 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH11P55287 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CDH11P55287 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH11P55287 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH11P55287 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CDH11P55287 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH11P55287 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH11P55287 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH11P55287 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CDH11P55287 ABHD17AP1-201ENST00000358206 933 ntBASIC17.99■□□□□ 0.47
CDH11P55287 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDH11P55287 AL162412.1-201ENST00000567129 965 ntBASIC17.99■□□□□ 0.47
CDH11P55287 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDH11P55287 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 AC004408.2-201ENST00000623613 2777 ntBASIC17.99■□□□□ 0.47
CDH11P55287 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDH11P55287 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.99■□□□□ 0.47
CDH11P55287 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CDH11P55287 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.99■□□□□ 0.47
CDH11P55287 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH11P55287 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.98■□□□□ 0.47
CDH11P55287 MIPEPP3-201ENST00000412105 444 ntBASIC17.98■□□□□ 0.47
CDH11P55287 AC073210.2-201ENST00000430369 194 ntBASIC17.98■□□□□ 0.47
CDH11P55287 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CDH11P55287 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms