Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 AC099778.1-201ENST00000568593 1911 ntBASIC20.9■□□□□ 0.94
CACNA2D1P54289 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.9■□□□□ 0.94
CACNA2D1P54289 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CACNA2D1P54289 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.89■□□□□ 0.94
CACNA2D1P54289 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
CACNA2D1P54289 PHGDH-210ENST00000641115 1638 ntBASIC20.89■□□□□ 0.94
CACNA2D1P54289 TFP1-202ENST00000475455 1573 ntBASIC20.89■□□□□ 0.94
CACNA2D1P54289 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CACNA2D1P54289 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CACNA2D1P54289 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CACNA2D1P54289 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA2D1P54289 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA2D1P54289 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA2D1P54289 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA2D1P54289 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.89■□□□□ 0.93
CACNA2D1P54289 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA2D1P54289 MOK-225ENST00000522867 1883 ntTSL 5 BASIC20.89■□□□□ 0.93
CACNA2D1P54289 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA2D1P54289 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA2D1P54289 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.89■□□□□ 0.93
CACNA2D1P54289 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CACNA2D1P54289 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.88■□□□□ 0.93
CACNA2D1P54289 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.88■□□□□ 0.93
CACNA2D1P54289 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.88■□□□□ 0.93
CACNA2D1P54289 LINC01521-201ENST00000504184 1943 ntBASIC20.88■□□□□ 0.93
CACNA2D1P54289 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CACNA2D1P54289 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CACNA2D1P54289 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.88■□□□□ 0.93
CACNA2D1P54289 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.88■□□□□ 0.93
CACNA2D1P54289 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.88■□□□□ 0.93
CACNA2D1P54289 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
CACNA2D1P54289 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CACNA2D1P54289 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CACNA2D1P54289 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA2D1P54289 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 AC112907.3-201ENST00000577781 2400 ntBASIC20.87■□□□□ 0.93
CACNA2D1P54289 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA2D1P54289 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA2D1P54289 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA2D1P54289 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA2D1P54289 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA2D1P54289 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CACNA2D1P54289 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.87■□□□□ 0.93
CACNA2D1P54289 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CACNA2D1P54289 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CACNA2D1P54289 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CACNA2D1P54289 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CACNA2D1P54289 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CACNA2D1P54289 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CACNA2D1P54289 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CACNA2D1P54289 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms