Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CLNS1AP54105 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CLNS1AP54105 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.56■□□□□ 0.72
CLNS1AP54105 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CLNS1AP54105 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.55■□□□□ 0.72
CLNS1AP54105 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLNS1AP54105 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.55■□□□□ 0.72
CLNS1AP54105 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 AC010141.2-201ENST00000452426 721 ntBASIC19.55■□□□□ 0.72
CLNS1AP54105 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.55■□□□□ 0.72
CLNS1AP54105 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.55■□□□□ 0.72
CLNS1AP54105 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CLNS1AP54105 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CLNS1AP54105 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.54■□□□□ 0.72
CLNS1AP54105 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.54■□□□□ 0.72
CLNS1AP54105 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLNS1AP54105 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.54■□□□□ 0.72
CLNS1AP54105 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.54■□□□□ 0.72
CLNS1AP54105 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.54■□□□□ 0.72
CLNS1AP54105 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.54■□□□□ 0.72
CLNS1AP54105 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CLNS1AP54105 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.54■□□□□ 0.72
CLNS1AP54105 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CLNS1AP54105 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CLNS1AP54105 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CLNS1AP54105 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.53■□□□□ 0.72
CLNS1AP54105 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CLNS1AP54105 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.53■□□□□ 0.72
CLNS1AP54105 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLNS1AP54105 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLNS1AP54105 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.53■□□□□ 0.72
CLNS1AP54105 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CLNS1AP54105 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CLNS1AP54105 IRS3P-201ENST00000223076 1006 ntBASIC19.53■□□□□ 0.72
CLNS1AP54105 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 AC027612.3-201ENST00000413684 1047 ntBASIC19.53■□□□□ 0.72
CLNS1AP54105 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.53■□□□□ 0.72
CLNS1AP54105 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.53■□□□□ 0.72
CLNS1AP54105 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.53■□□□□ 0.72
CLNS1AP54105 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 AC125437.2-201ENST00000625180 2167 ntBASIC19.53■□□□□ 0.72
CLNS1AP54105 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLNS1AP54105 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.52■□□□□ 0.72
CLNS1AP54105 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
CLNS1AP54105 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.52■□□□□ 0.72
CLNS1AP54105 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.52■□□□□ 0.72
CLNS1AP54105 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLNS1AP54105 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.52■□□□□ 0.72
CLNS1AP54105 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CLNS1AP54105 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms