Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 COX11P1-201ENST00000489116 835 ntBASIC21.83■■□□□ 1.09
ACLYP53396 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.83■■□□□ 1.09
ACLYP53396 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ACLYP53396 AC010653.2-201ENST00000623505 997 ntBASIC21.83■■□□□ 1.09
ACLYP53396 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ACLYP53396 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.83■■□□□ 1.09
ACLYP53396 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ACLYP53396 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.83■■□□□ 1.08
ACLYP53396 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.83■■□□□ 1.08
ACLYP53396 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ACLYP53396 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ACLYP53396 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACLYP53396 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.82■■□□□ 1.08
ACLYP53396 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACLYP53396 PHGDH-210ENST00000641115 1638 ntBASIC21.82■■□□□ 1.08
ACLYP53396 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACLYP53396 AC092647.4-201ENST00000457211 535 ntBASIC21.82■■□□□ 1.08
ACLYP53396 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.82■■□□□ 1.08
ACLYP53396 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
ACLYP53396 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.82■■□□□ 1.08
ACLYP53396 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC21.82■■□□□ 1.08
ACLYP53396 AP000550.4-202ENST00000639755 178 ntBASIC21.82■■□□□ 1.08
ACLYP53396 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACLYP53396 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACLYP53396 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.82■■□□□ 1.08
ACLYP53396 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ACLYP53396 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACLYP53396 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACLYP53396 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
ACLYP53396 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACLYP53396 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACLYP53396 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACLYP53396 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACLYP53396 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.81■■□□□ 1.08
ACLYP53396 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.81■■□□□ 1.08
ACLYP53396 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.81■■□□□ 1.08
ACLYP53396 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
ACLYP53396 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.81■■□□□ 1.08
ACLYP53396 KRT18P56-201ENST00000507275 550 ntBASIC21.81■■□□□ 1.08
ACLYP53396 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.81■■□□□ 1.08
ACLYP53396 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.81■■□□□ 1.08
ACLYP53396 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.81■■□□□ 1.08
ACLYP53396 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.81■■□□□ 1.08
ACLYP53396 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ACLYP53396 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACLYP53396 AC092338.2-201ENST00000568827 1415 ntBASIC21.8■■□□□ 1.08
ACLYP53396 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.8■■□□□ 1.08
ACLYP53396 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACLYP53396 AL117328.2-201ENST00000624617 1940 ntBASIC21.8■■□□□ 1.08
ACLYP53396 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACLYP53396 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACLYP53396 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.8■■□□□ 1.08
ACLYP53396 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ACLYP53396 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACLYP53396 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
ACLYP53396 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ACLYP53396 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ACLYP53396 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
ACLYP53396 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.8■■□□□ 1.08
ACLYP53396 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.8■■□□□ 1.08
ACLYP53396 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.8■■□□□ 1.08
ACLYP53396 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.8■■□□□ 1.08
ACLYP53396 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.8■■□□□ 1.08
ACLYP53396 AC141257.4-201ENST00000634557 245 ntBASIC21.8■■□□□ 1.08
ACLYP53396 AC136944.6-201ENST00000634818 245 ntBASIC21.8■■□□□ 1.08
ACLYP53396 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ACLYP53396 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
ACLYP53396 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ACLYP53396 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.8■■□□□ 1.08
ACLYP53396 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
ACLYP53396 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
ACLYP53396 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
ACLYP53396 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.79■■□□□ 1.08
ACLYP53396 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
ACLYP53396 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ACLYP53396 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACLYP53396 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACLYP53396 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
ACLYP53396 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.79■■□□□ 1.08
ACLYP53396 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ACLYP53396 AC009947.2-201ENST00000444014 672 ntBASIC21.79■■□□□ 1.08
ACLYP53396 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.79■■□□□ 1.08
ACLYP53396 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.79■■□□□ 1.08
ACLYP53396 AC011558.1-201ENST00000623459 338 ntBASIC21.79■■□□□ 1.08
ACLYP53396 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ACLYP53396 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
ACLYP53396 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.79■■□□□ 1.08
ACLYP53396 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC21.79■■□□□ 1.08
ACLYP53396 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
ACLYP53396 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
ACLYP53396 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACLYP53396 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACLYP53396 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.78■■□□□ 1.08
ACLYP53396 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACLYP53396 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.78■■□□□ 1.08
ACLYP53396 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
ACLYP53396 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.78■■□□□ 1.08
ACLYP53396 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC21.78■■□□□ 1.08
ACLYP53396 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.78■■□□□ 1.08
ACLYP53396 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms