Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1P51610 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1P51610 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HCFC1P51610 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1P51610 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1P51610 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HCFC1P51610 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1P51610 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1P51610 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.23■□□□□ 0.35
HCFC1P51610 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HCFC1P51610 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.23■□□□□ 0.35
HCFC1P51610 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.23■□□□□ 0.35
HCFC1P51610 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.23■□□□□ 0.35
HCFC1P51610 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.23■□□□□ 0.35
HCFC1P51610 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.23■□□□□ 0.35
HCFC1P51610 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1P51610 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1P51610 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1P51610 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.22■□□□□ 0.35
HCFC1P51610 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.22■□□□□ 0.35
HCFC1P51610 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.22■□□□□ 0.35
HCFC1P51610 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.22■□□□□ 0.35
HCFC1P51610 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1P51610 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1P51610 AL049796.1-201ENST00000565336 1766 ntBASIC17.22■□□□□ 0.35
HCFC1P51610 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1P51610 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.22■□□□□ 0.35
HCFC1P51610 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.22■□□□□ 0.35
HCFC1P51610 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1P51610 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HCFC1P51610 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HCFC1P51610 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCFC1P51610 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCFC1P51610 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.21■□□□□ 0.35
HCFC1P51610 AC063952.2-201ENST00000498792 1227 ntBASIC17.21■□□□□ 0.35
HCFC1P51610 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCFC1P51610 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.21■□□□□ 0.35
HCFC1P51610 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCFC1P51610 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HCFC1P51610 AL157384.1-201ENST00000445995 2473 ntBASIC17.21■□□□□ 0.35
HCFC1P51610 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HCFC1P51610 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
HCFC1P51610 TSPY14P-201ENST00000303979 915 ntBASIC17.21■□□□□ 0.35
HCFC1P51610 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCFC1P51610 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.21■□□□□ 0.35
HCFC1P51610 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
HCFC1P51610 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HCFC1P51610 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HCFC1P51610 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.21■□□□□ 0.35
HCFC1P51610 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.21■□□□□ 0.35
HCFC1P51610 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HCFC1P51610 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
HCFC1P51610 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HCFC1P51610 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.21■□□□□ 0.34
HCFC1P51610 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
HCFC1P51610 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
HCFC1P51610 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.2■□□□□ 0.34
HCFC1P51610 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
HCFC1P51610 AP006587.1-201ENST00000534129 1502 ntBASIC17.2■□□□□ 0.34
HCFC1P51610 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.2■□□□□ 0.34
HCFC1P51610 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.2■□□□□ 0.34
HCFC1P51610 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.2■□□□□ 0.34
HCFC1P51610 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.2■□□□□ 0.34
HCFC1P51610 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.2■□□□□ 0.34
HCFC1P51610 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.2■□□□□ 0.34
HCFC1P51610 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
HCFC1P51610 AP005242.2-201ENST00000580065 1175 ntBASIC17.2■□□□□ 0.34
HCFC1P51610 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.2■□□□□ 0.34
HCFC1P51610 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.2■□□□□ 0.34
HCFC1P51610 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HCFC1P51610 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.2■□□□□ 0.34
HCFC1P51610 AC121338.2-201ENST00000622535 1744 ntBASIC17.2■□□□□ 0.34
HCFC1P51610 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.2■□□□□ 0.34
HCFC1P51610 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 HMGA1P5-201ENST00000412453 271 ntBASIC17.2■□□□□ 0.34
HCFC1P51610 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HCFC1P51610 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.2■□□□□ 0.34
HCFC1P51610 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.19■□□□□ 0.34
HCFC1P51610 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.19■□□□□ 0.34
HCFC1P51610 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.19■□□□□ 0.34
HCFC1P51610 AC018553.1-201ENST00000616682 1458 ntBASIC17.19■□□□□ 0.34
HCFC1P51610 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1P51610 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.19■□□□□ 0.34
HCFC1P51610 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.19■□□□□ 0.34
HCFC1P51610 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.19■□□□□ 0.34
HCFC1P51610 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HCFC1P51610 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms