Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.84■■□□□ 1.09
CDK7P50613 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.84■■□□□ 1.09
CDK7P50613 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CDK7P50613 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CDK7P50613 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.84■■□□□ 1.09
CDK7P50613 HMGA1P5-201ENST00000412453 271 ntBASIC21.84■■□□□ 1.09
CDK7P50613 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 YBX1P10-201ENST00000444752 975 ntBASIC21.84■■□□□ 1.09
CDK7P50613 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.84■■□□□ 1.09
CDK7P50613 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
CDK7P50613 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.84■■□□□ 1.09
CDK7P50613 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDK7P50613 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDK7P50613 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDK7P50613 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDK7P50613 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.83■■□□□ 1.09
CDK7P50613 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.83■■□□□ 1.09
CDK7P50613 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDK7P50613 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDK7P50613 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDK7P50613 AL031133.1-201ENST00000406807 723 ntBASIC21.83■■□□□ 1.09
CDK7P50613 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CDK7P50613 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.83■■□□□ 1.09
CDK7P50613 AC008040.2-201ENST00000461049 708 ntBASIC21.83■■□□□ 1.09
CDK7P50613 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.83■■□□□ 1.09
CDK7P50613 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.83■■□□□ 1.09
CDK7P50613 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDK7P50613 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.83■■□□□ 1.08
CDK7P50613 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CDK7P50613 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK7P50613 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK7P50613 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDK7P50613 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK7P50613 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.82■■□□□ 1.08
CDK7P50613 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.82■■□□□ 1.08
CDK7P50613 TUBB8P6-201ENST00000436895 1288 ntBASIC21.82■■□□□ 1.08
CDK7P50613 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK7P50613 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDK7P50613 SLC25A1P4-201ENST00000567977 778 ntBASIC21.82■■□□□ 1.08
CDK7P50613 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.82■■□□□ 1.08
CDK7P50613 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.82■■□□□ 1.08
CDK7P50613 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CDK7P50613 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK7P50613 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDK7P50613 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDK7P50613 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDK7P50613 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK7P50613 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK7P50613 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDK7P50613 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.81■■□□□ 1.08
CDK7P50613 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDK7P50613 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK7P50613 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.81■■□□□ 1.08
CDK7P50613 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK7P50613 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.81■■□□□ 1.08
CDK7P50613 RNF152P1-201ENST00000397754 604 ntBASIC21.81■■□□□ 1.08
CDK7P50613 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDK7P50613 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CDK7P50613 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.81■■□□□ 1.08
CDK7P50613 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.81■■□□□ 1.08
CDK7P50613 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.81■■□□□ 1.08
CDK7P50613 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.81■■□□□ 1.08
CDK7P50613 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.81■■□□□ 1.08
CDK7P50613 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.81■■□□□ 1.08
CDK7P50613 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDK7P50613 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CDK7P50613 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC21.8■■□□□ 1.08
CDK7P50613 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.8■■□□□ 1.08
CDK7P50613 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CDK7P50613 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CDK7P50613 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CDK7P50613 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.8■■□□□ 1.08
CDK7P50613 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CDK7P50613 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CDK7P50613 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.8■■□□□ 1.08
CDK7P50613 AC139887.4-201ENST00000607877 719 ntBASIC21.8■■□□□ 1.08
CDK7P50613 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.8■■□□□ 1.08
CDK7P50613 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDK7P50613 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms