Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.81■□□□□ 0.6
SSR2P43308 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.81■□□□□ 0.6
SSR2P43308 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SSR2P43308 AC018553.1-201ENST00000616682 1458 ntBASIC18.81■□□□□ 0.6
SSR2P43308 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SSR2P43308 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.81■□□□□ 0.6
SSR2P43308 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.81■□□□□ 0.6
SSR2P43308 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SSR2P43308 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SSR2P43308 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SSR2P43308 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSR2P43308 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SSR2P43308 AC116351.2-201ENST00000606540 1585 ntBASIC18.81■□□□□ 0.6
SSR2P43308 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.8■□□□□ 0.6
SSR2P43308 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.8■□□□□ 0.6
SSR2P43308 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SSR2P43308 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SSR2P43308 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.8■□□□□ 0.6
SSR2P43308 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.8■□□□□ 0.6
SSR2P43308 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SSR2P43308 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.8■□□□□ 0.6
SSR2P43308 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.8■□□□□ 0.6
SSR2P43308 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SSR2P43308 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.8■□□□□ 0.6
SSR2P43308 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.8■□□□□ 0.6
SSR2P43308 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSR2P43308 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SSR2P43308 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.79■□□□□ 0.6
SSR2P43308 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SSR2P43308 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.79■□□□□ 0.6
SSR2P43308 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SSR2P43308 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SSR2P43308 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SSR2P43308 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SSR2P43308 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SSR2P43308 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR2P43308 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.79■□□□□ 0.6
SSR2P43308 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.79■□□□□ 0.6
SSR2P43308 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.79■□□□□ 0.6
SSR2P43308 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SSR2P43308 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.79■□□□□ 0.6
SSR2P43308 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.79■□□□□ 0.6
SSR2P43308 UNC93B5-201ENST00000530315 699 ntBASIC18.79■□□□□ 0.6
SSR2P43308 KRT18P6-201ENST00000555540 1265 ntBASIC18.79■□□□□ 0.6
SSR2P43308 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR2P43308 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SSR2P43308 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SSR2P43308 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.79■□□□□ 0.6
SSR2P43308 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SSR2P43308 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SSR2P43308 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSR2P43308 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.79■□□□□ 0.6
SSR2P43308 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
SSR2P43308 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SSR2P43308 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
SSR2P43308 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SSR2P43308 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR2P43308 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR2P43308 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR2P43308 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.78■□□□□ 0.6
SSR2P43308 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR2P43308 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.78■□□□□ 0.6
SSR2P43308 UNC93B4-201ENST00000505679 747 ntBASIC18.78■□□□□ 0.6
SSR2P43308 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SSR2P43308 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.78■□□□□ 0.6
SSR2P43308 AC008687.6-201ENST00000596318 630 ntBASIC18.78■□□□□ 0.6
SSR2P43308 AL121906.2-201ENST00000621597 723 ntBASIC18.78■□□□□ 0.6
SSR2P43308 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.78■□□□□ 0.6
SSR2P43308 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SSR2P43308 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSR2P43308 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.78■□□□□ 0.6
SSR2P43308 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SSR2P43308 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.77■□□□□ 0.6
SSR2P43308 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SSR2P43308 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
SSR2P43308 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms