Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC1A3P43003 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SLC1A3P43003 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC1A3P43003 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.11■□□□□ 0.49
SLC1A3P43003 AC097658.1-201ENST00000475555 843 ntBASIC18.11■□□□□ 0.49
SLC1A3P43003 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC1A3P43003 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.11■□□□□ 0.49
SLC1A3P43003 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC1A3P43003 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SLC1A3P43003 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC1A3P43003 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.11■□□□□ 0.49
SLC1A3P43003 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC1A3P43003 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC1A3P43003 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A3P43003 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SLC1A3P43003 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC1A3P43003 AC073210.2-201ENST00000430369 194 ntBASIC18.1■□□□□ 0.49
SLC1A3P43003 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC1A3P43003 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC1A3P43003 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC1A3P43003 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.1■□□□□ 0.49
SLC1A3P43003 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC1A3P43003 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC1A3P43003 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
SLC1A3P43003 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A3P43003 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A3P43003 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC1A3P43003 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC1A3P43003 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC1A3P43003 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A3P43003 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A3P43003 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC1A3P43003 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A3P43003 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A3P43003 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC1A3P43003 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC1A3P43003 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC1A3P43003 AL138781.1-201ENST00000566567 1274 ntBASIC18.09■□□□□ 0.49
SLC1A3P43003 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC1A3P43003 AC104771.1-201ENST00000603335 964 ntBASIC18.09■□□□□ 0.49
SLC1A3P43003 MYC-209ENST00000641252 345 ntBASIC18.09■□□□□ 0.49
SLC1A3P43003 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A3P43003 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SLC1A3P43003 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A3P43003 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC1A3P43003 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A3P43003 AP000974.1-201ENST00000623909 2387 ntBASIC18.09■□□□□ 0.49
SLC1A3P43003 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A3P43003 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC1A3P43003 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC1A3P43003 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.08■□□□□ 0.49
SLC1A3P43003 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.08■□□□□ 0.49
SLC1A3P43003 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.08■□□□□ 0.49
SLC1A3P43003 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SLC1A3P43003 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.08■□□□□ 0.49
SLC1A3P43003 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SLC1A3P43003 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.08■□□□□ 0.49
SLC1A3P43003 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
SLC1A3P43003 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC1A3P43003 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A3P43003 AL390719.1-204ENST00000412397 1219 ntBASIC18.08■□□□□ 0.48
SLC1A3P43003 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC1A3P43003 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A3P43003 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
SLC1A3P43003 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A3P43003 AC009237.14-201ENST00000609975 1594 ntBASIC18.08■□□□□ 0.48
SLC1A3P43003 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A3P43003 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC1A3P43003 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SLC1A3P43003 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A3P43003 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A3P43003 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A3P43003 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A3P43003 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A3P43003 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A3P43003 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC1A3P43003 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SLC1A3P43003 ID1-201ENST00000376105 1233 ntBASIC18.07■□□□□ 0.48
SLC1A3P43003 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC1A3P43003 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms