Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT20P35900 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
KRT20P35900 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
KRT20P35900 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT20P35900 ID1-201ENST00000376105 1233 ntBASIC18.7■□□□□ 0.58
KRT20P35900 HLA-L-209ENST00000420110 1011 ntBASIC18.7■□□□□ 0.58
KRT20P35900 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT20P35900 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
KRT20P35900 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT20P35900 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.7■□□□□ 0.58
KRT20P35900 AC104771.1-201ENST00000603335 964 ntBASIC18.7■□□□□ 0.58
KRT20P35900 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT20P35900 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT20P35900 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT20P35900 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT20P35900 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
KRT20P35900 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT20P35900 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT20P35900 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT20P35900 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT20P35900 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT20P35900 AC125437.2-201ENST00000625180 2167 ntBASIC18.69■□□□□ 0.58
KRT20P35900 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT20P35900 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
KRT20P35900 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.69■□□□□ 0.58
KRT20P35900 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT20P35900 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.69■□□□□ 0.58
KRT20P35900 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.69■□□□□ 0.58
KRT20P35900 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.69■□□□□ 0.58
KRT20P35900 AC092118.2-201ENST00000613495 667 ntBASIC18.69■□□□□ 0.58
KRT20P35900 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT20P35900 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT20P35900 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT20P35900 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT20P35900 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 AL158211.5-201ENST00000623583 2518 ntBASIC18.68■□□□□ 0.58
KRT20P35900 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRT20P35900 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT20P35900 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
KRT20P35900 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
KRT20P35900 AL355802.2-201ENST00000402069 882 ntBASIC18.68■□□□□ 0.58
KRT20P35900 GUSBP6-202ENST00000438529 1198 ntBASIC18.68■□□□□ 0.58
KRT20P35900 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT20P35900 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRT20P35900 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT20P35900 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
KRT20P35900 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRT20P35900 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT20P35900 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT20P35900 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT20P35900 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT20P35900 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT20P35900 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT20P35900 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
KRT20P35900 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT20P35900 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT20P35900 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KRT20P35900 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT20P35900 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
KRT20P35900 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
KRT20P35900 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT20P35900 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
KRT20P35900 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT20P35900 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.66■□□□□ 0.58
KRT20P35900 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT20P35900 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
KRT20P35900 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT20P35900 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT20P35900 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KRT20P35900 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT20P35900 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KRT20P35900 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms