Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.5□□□□□ -0.09
CKS2P33552 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CKS2P33552 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.5□□□□□ -0.09
CKS2P33552 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.5□□□□□ -0.09
CKS2P33552 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CKS2P33552 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC14.49□□□□□ -0.09
CKS2P33552 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CKS2P33552 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.49□□□□□ -0.09
CKS2P33552 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CKS2P33552 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CKS2P33552 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CKS2P33552 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.49□□□□□ -0.09
CKS2P33552 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CKS2P33552 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.49□□□□□ -0.09
CKS2P33552 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CKS2P33552 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC14.49□□□□□ -0.09
CKS2P33552 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.49□□□□□ -0.09
CKS2P33552 RARRES2P11-201ENST00000635158 484 ntBASIC14.49□□□□□ -0.09
CKS2P33552 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.49□□□□□ -0.09
CKS2P33552 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.49□□□□□ -0.09
CKS2P33552 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.49□□□□□ -0.09
CKS2P33552 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CKS2P33552 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CKS2P33552 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CKS2P33552 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.48□□□□□ -0.09
CKS2P33552 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.48□□□□□ -0.09
CKS2P33552 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CKS2P33552 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 AC079598.2-202ENST00000546624 1451 ntBASIC14.48□□□□□ -0.09
CKS2P33552 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
CKS2P33552 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CKS2P33552 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 AL049812.1-201ENST00000432563 2267 ntBASIC14.48□□□□□ -0.09
CKS2P33552 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CKS2P33552 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CKS2P33552 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CKS2P33552 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC14.47□□□□□ -0.09
CKS2P33552 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC14.47□□□□□ -0.09
CKS2P33552 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.47□□□□□ -0.09
CKS2P33552 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CKS2P33552 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
CKS2P33552 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.47□□□□□ -0.09
CKS2P33552 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC14.47□□□□□ -0.09
CKS2P33552 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CKS2P33552 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC14.47□□□□□ -0.09
CKS2P33552 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CKS2P33552 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CKS2P33552 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.47□□□□□ -0.09
CKS2P33552 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 KRT8P36-201ENST00000489121 1440 ntBASIC14.47□□□□□ -0.09
CKS2P33552 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 AC005332.8-201ENST00000622750 2735 ntBASIC14.47□□□□□ -0.09
CKS2P33552 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CKS2P33552 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.47□□□□□ -0.09
CKS2P33552 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC14.47□□□□□ -0.09
CKS2P33552 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms