Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP11P24347 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP11P24347 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
MMP11P24347 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP11P24347 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP11P24347 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP11P24347 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP11P24347 RPS2P55-201ENST00000397318 883 ntBASIC18.73■□□□□ 0.59
MMP11P24347 AC107956.1-201ENST00000494359 873 ntBASIC18.73■□□□□ 0.59
MMP11P24347 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.73■□□□□ 0.59
MMP11P24347 AC233702.5-201ENST00000584107 538 ntBASIC18.73■□□□□ 0.59
MMP11P24347 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.73■□□□□ 0.59
MMP11P24347 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP11P24347 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP11P24347 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.73■□□□□ 0.59
MMP11P24347 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MMP11P24347 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MMP11P24347 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
MMP11P24347 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
MMP11P24347 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 PTBP1P-201ENST00000554374 1601 ntBASIC18.72■□□□□ 0.59
MMP11P24347 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP11P24347 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MMP11P24347 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.72■□□□□ 0.59
MMP11P24347 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP11P24347 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP11P24347 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
MMP11P24347 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.72■□□□□ 0.59
MMP11P24347 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.72■□□□□ 0.59
MMP11P24347 AP001412.1-201ENST00000608405 714 ntBASIC18.72■□□□□ 0.59
MMP11P24347 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.72■□□□□ 0.59
MMP11P24347 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.72■□□□□ 0.59
MMP11P24347 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.72■□□□□ 0.59
MMP11P24347 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.72■□□□□ 0.59
MMP11P24347 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.72■□□□□ 0.59
MMP11P24347 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MMP11P24347 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP11P24347 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP11P24347 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP11P24347 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP11P24347 AC092720.2-201ENST00000602388 1665 ntBASIC18.71■□□□□ 0.59
MMP11P24347 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP11P24347 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
MMP11P24347 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP11P24347 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MMP11P24347 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
MMP11P24347 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP11P24347 SNORA78-201ENST00000459373 127 ntBASIC18.71■□□□□ 0.59
MMP11P24347 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.71■□□□□ 0.59
MMP11P24347 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.71■□□□□ 0.59
MMP11P24347 AL121906.2-201ENST00000621597 723 ntBASIC18.71■□□□□ 0.59
MMP11P24347 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP11P24347 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
MMP11P24347 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP11P24347 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP11P24347 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP11P24347 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.71■□□□□ 0.59
MMP11P24347 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MMP11P24347 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MMP11P24347 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MMP11P24347 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP11P24347 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
MMP11P24347 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
MMP11P24347 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
MMP11P24347 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MMP11P24347 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 KRT8P20-201ENST00000423953 1409 ntBASIC18.7■□□□□ 0.58
MMP11P24347 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP11P24347 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP11P24347 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.7■□□□□ 0.58
MMP11P24347 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.7■□□□□ 0.58
MMP11P24347 RARRES2P10-201ENST00000564312 460 ntBASIC18.7■□□□□ 0.58
MMP11P24347 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
MMP11P24347 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.7■□□□□ 0.58
MMP11P24347 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
MMP11P24347 AC124283.5-201ENST00000624661 1809 ntBASIC18.7■□□□□ 0.58
MMP11P24347 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP11P24347 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MMP11P24347 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.69■□□□□ 0.58
MMP11P24347 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms