Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC130P13994 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC130P13994 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.92■□□□□ 0.94
CCDC130P13994 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC130P13994 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC130P13994 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC130P13994 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC130P13994 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC130P13994 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC130P13994 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CCDC130P13994 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC130P13994 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC130P13994 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.91■□□□□ 0.94
CCDC130P13994 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.91■□□□□ 0.94
CCDC130P13994 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.91■□□□□ 0.94
CCDC130P13994 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
CCDC130P13994 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC130P13994 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 AP006587.1-201ENST00000534129 1502 ntBASIC20.9■□□□□ 0.94
CCDC130P13994 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC130P13994 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CCDC130P13994 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CCDC130P13994 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC130P13994 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.9■□□□□ 0.94
CCDC130P13994 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC130P13994 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CCDC130P13994 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC130P13994 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.9■□□□□ 0.94
CCDC130P13994 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
CCDC130P13994 AP001271.2-201ENST00000624018 1556 ntBASIC20.89■□□□□ 0.94
CCDC130P13994 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC130P13994 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CCDC130P13994 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CCDC130P13994 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC130P13994 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC130P13994 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC130P13994 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC130P13994 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CCDC130P13994 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC130P13994 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC130P13994 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC130P13994 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CCDC130P13994 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC130P13994 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC130P13994 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.89■□□□□ 0.93
CCDC130P13994 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.89■□□□□ 0.93
CCDC130P13994 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.89■□□□□ 0.93
CCDC130P13994 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.89■□□□□ 0.93
CCDC130P13994 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC130P13994 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
CCDC130P13994 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
CCDC130P13994 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC130P13994 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC130P13994 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC130P13994 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC130P13994 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC130P13994 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC130P13994 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC130P13994 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC130P13994 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC130P13994 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC130P13994 UBE2SP1-201ENST00000450587 669 ntBASIC20.88■□□□□ 0.93
CCDC130P13994 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC130P13994 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.88■□□□□ 0.93
CCDC130P13994 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC130P13994 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC130P13994 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.88■□□□□ 0.93
CCDC130P13994 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC130P13994 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC130P13994 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC130P13994 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CCDC130P13994 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC130P13994 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.87■□□□□ 0.93
CCDC130P13994 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC130P13994 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC130P13994 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC130P13994 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms