Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCL4P13236 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL4P13236 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.65■□□□□ 0.58
CCL4P13236 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 TSPY14P-201ENST00000303979 915 ntBASIC18.65■□□□□ 0.58
CCL4P13236 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCL4P13236 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.65■□□□□ 0.58
CCL4P13236 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
CCL4P13236 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.65■□□□□ 0.58
CCL4P13236 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.65■□□□□ 0.58
CCL4P13236 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL4P13236 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL4P13236 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CCL4P13236 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 AC130371.2-201ENST00000619443 611 ntBASIC18.65■□□□□ 0.58
CCL4P13236 HLA-A-209ENST00000638375 975 ntBASIC18.65■□□□□ 0.58
CCL4P13236 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.65■□□□□ 0.58
CCL4P13236 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CCL4P13236 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL4P13236 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL4P13236 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCL4P13236 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CCL4P13236 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.65■□□□□ 0.58
CCL4P13236 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CCL4P13236 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCL4P13236 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CCL4P13236 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCL4P13236 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL4P13236 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.64■□□□□ 0.57
CCL4P13236 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCL4P13236 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL4P13236 LIN28AP1-201ENST00000429574 405 ntBASIC18.64■□□□□ 0.57
CCL4P13236 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL4P13236 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCL4P13236 AC008040.2-201ENST00000461049 708 ntBASIC18.64■□□□□ 0.57
CCL4P13236 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CCL4P13236 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL4P13236 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.64■□□□□ 0.57
CCL4P13236 NTF6B-201ENST00000591913 560 ntBASIC18.64■□□□□ 0.57
CCL4P13236 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 RCC2P6-201ENST00000526625 1557 ntBASIC18.64■□□□□ 0.57
CCL4P13236 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL4P13236 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL4P13236 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL4P13236 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 ATP5G1P1-201ENST00000448724 379 ntBASIC18.63■□□□□ 0.57
CCL4P13236 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL4P13236 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.63■□□□□ 0.57
CCL4P13236 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.63■□□□□ 0.57
CCL4P13236 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCL4P13236 AC011298.2-201ENST00000617989 482 ntBASIC18.63■□□□□ 0.57
CCL4P13236 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL4P13236 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL4P13236 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL4P13236 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.63■□□□□ 0.57
CCL4P13236 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL4P13236 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL4P13236 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCL4P13236 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCL4P13236 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCL4P13236 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CCL4P13236 AP000692.2-201ENST00000608391 879 ntBASIC18.62■□□□□ 0.57
CCL4P13236 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCL4P13236 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCL4P13236 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms