Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CTSDP07339 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.36■□□□□ 0.21
CTSDP07339 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.36■□□□□ 0.21
CTSDP07339 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.36■□□□□ 0.21
CTSDP07339 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CTSDP07339 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.36■□□□□ 0.21
CTSDP07339 CROCCP3-202ENST00000420820 1947 ntBASIC16.36■□□□□ 0.21
CTSDP07339 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CTSDP07339 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CTSDP07339 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTSDP07339 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.35■□□□□ 0.21
CTSDP07339 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSDP07339 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSDP07339 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSDP07339 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSDP07339 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSDP07339 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.35■□□□□ 0.21
CTSDP07339 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSDP07339 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSDP07339 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CTSDP07339 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CTSDP07339 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CTSDP07339 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSDP07339 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.35■□□□□ 0.21
CTSDP07339 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSDP07339 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTSDP07339 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTSDP07339 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.35■□□□□ 0.21
CTSDP07339 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSDP07339 AL031963.3-201ENST00000606441 850 ntBASIC16.35■□□□□ 0.21
CTSDP07339 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.35■□□□□ 0.21
CTSDP07339 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CTSDP07339 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTSDP07339 AC019069.1-201ENST00000610008 1333 ntBASIC16.35■□□□□ 0.21
CTSDP07339 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.35■□□□□ 0.21
CTSDP07339 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CTSDP07339 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CTSDP07339 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CTSDP07339 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CTSDP07339 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CTSDP07339 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CTSDP07339 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CTSDP07339 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.34■□□□□ 0.21
CTSDP07339 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.34■□□□□ 0.21
CTSDP07339 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.34■□□□□ 0.21
CTSDP07339 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.34■□□□□ 0.21
CTSDP07339 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.34■□□□□ 0.21
CTSDP07339 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CTSDP07339 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.34■□□□□ 0.21
CTSDP07339 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTSDP07339 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTSDP07339 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTSDP07339 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTSDP07339 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTSDP07339 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CTSDP07339 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 AC027612.3-201ENST00000413684 1047 ntBASIC16.33■□□□□ 0.2
CTSDP07339 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.33■□□□□ 0.2
CTSDP07339 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.33■□□□□ 0.2
CTSDP07339 LINC02228-203ENST00000641970 1355 ntBASIC16.33■□□□□ 0.2
CTSDP07339 KRT8P20-201ENST00000423953 1409 ntBASIC16.33■□□□□ 0.2
CTSDP07339 CYP21A1P-202ENST00000354927 1481 ntBASIC16.33■□□□□ 0.2
CTSDP07339 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.33■□□□□ 0.2
CTSDP07339 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.33■□□□□ 0.2
CTSDP07339 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CTSDP07339 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTSDP07339 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
CTSDP07339 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CTSDP07339 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.33■□□□□ 0.2
CTSDP07339 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms