Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
ZBED1O96006 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZBED1O96006 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZBED1O96006 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.84■□□□□ 0.93
ZBED1O96006 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZBED1O96006 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.84■□□□□ 0.93
ZBED1O96006 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZBED1O96006 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ZBED1O96006 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ZBED1O96006 AC098590.1-201ENST00000468126 897 ntBASIC20.84■□□□□ 0.93
ZBED1O96006 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.84■□□□□ 0.93
ZBED1O96006 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.84■□□□□ 0.93
ZBED1O96006 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZBED1O96006 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZBED1O96006 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.84■□□□□ 0.93
ZBED1O96006 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
ZBED1O96006 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZBED1O96006 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZBED1O96006 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
ZBED1O96006 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
ZBED1O96006 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.83■□□□□ 0.93
ZBED1O96006 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ZBED1O96006 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
ZBED1O96006 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.83■□□□□ 0.93
ZBED1O96006 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZBED1O96006 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZBED1O96006 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
ZBED1O96006 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ZBED1O96006 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
ZBED1O96006 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.82■□□□□ 0.92
ZBED1O96006 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
ZBED1O96006 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.82■□□□□ 0.92
ZBED1O96006 C1QBPP2-201ENST00000528754 825 ntBASIC20.82■□□□□ 0.92
ZBED1O96006 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ZBED1O96006 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
ZBED1O96006 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.82■□□□□ 0.92
ZBED1O96006 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.82■□□□□ 0.92
ZBED1O96006 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
ZBED1O96006 PHGDH-210ENST00000641115 1638 ntBASIC20.82■□□□□ 0.92
ZBED1O96006 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ZBED1O96006 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZBED1O96006 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
ZBED1O96006 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
ZBED1O96006 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 GCSHP5-201ENST00000443090 522 ntBASIC20.81■□□□□ 0.92
ZBED1O96006 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.81■□□□□ 0.92
ZBED1O96006 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.81■□□□□ 0.92
ZBED1O96006 RPPH1-201ENST00000516869 333 ntBASIC20.81■□□□□ 0.92
ZBED1O96006 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.81■□□□□ 0.92
ZBED1O96006 PRKY-204ENST00000533551 1019 ntBASIC20.81■□□□□ 0.92
ZBED1O96006 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.81■□□□□ 0.92
ZBED1O96006 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.81■□□□□ 0.92
ZBED1O96006 AC142381.4-202ENST00000563973 229 ntBASIC20.81■□□□□ 0.92
ZBED1O96006 AL023875.1-201ENST00000640777 796 ntBASIC20.81■□□□□ 0.92
ZBED1O96006 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.81■□□□□ 0.92
ZBED1O96006 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZBED1O96006 AC116351.2-201ENST00000606540 1585 ntBASIC20.8■□□□□ 0.92
ZBED1O96006 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZBED1O96006 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
ZBED1O96006 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZBED1O96006 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.8■□□□□ 0.92
ZBED1O96006 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZBED1O96006 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZBED1O96006 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZBED1O96006 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.8■□□□□ 0.92
ZBED1O96006 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZBED1O96006 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.8■□□□□ 0.92
ZBED1O96006 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.8■□□□□ 0.92
ZBED1O96006 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.8■□□□□ 0.92
ZBED1O96006 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.8■□□□□ 0.92
ZBED1O96006 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.8■□□□□ 0.92
ZBED1O96006 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.8■□□□□ 0.92
ZBED1O96006 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms