Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MYC-208ENST00000641036 567 ntBASIC17.62■□□□□ 0.41
CLDN1O95832 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLDN1O95832 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN1O95832 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN1O95832 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLDN1O95832 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLDN1O95832 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 AL031133.1-201ENST00000406807 723 ntBASIC17.61■□□□□ 0.41
CLDN1O95832 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 KSR1P1-201ENST00000446298 240 ntBASIC17.61■□□□□ 0.41
CLDN1O95832 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN1O95832 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN1O95832 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN1O95832 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 KRT16P1-201ENST00000399124 1418 ntBASIC17.61■□□□□ 0.41
CLDN1O95832 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN1O95832 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLDN1O95832 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN1O95832 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN1O95832 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLDN1O95832 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN1O95832 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN1O95832 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN1O95832 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN1O95832 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN1O95832 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN1O95832 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN1O95832 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN1O95832 NIFKP9-201ENST00000419265 221 ntBASIC17.6■□□□□ 0.41
CLDN1O95832 BX664615.1-201ENST00000443558 458 ntBASIC17.6■□□□□ 0.41
CLDN1O95832 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN1O95832 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.6■□□□□ 0.41
CLDN1O95832 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.6■□□□□ 0.41
CLDN1O95832 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN1O95832 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.6■□□□□ 0.41
CLDN1O95832 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLDN1O95832 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN1O95832 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN1O95832 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN1O95832 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN1O95832 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN1O95832 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN1O95832 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLDN1O95832 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLDN1O95832 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN1O95832 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLDN1O95832 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLDN1O95832 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLDN1O95832 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.59■□□□□ 0.41
CLDN1O95832 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN1O95832 C2orf69P3-201ENST00000565542 1120 ntBASIC17.59■□□□□ 0.41
CLDN1O95832 AL121906.2-201ENST00000621597 723 ntBASIC17.59■□□□□ 0.41
CLDN1O95832 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.59■□□□□ 0.41
CLDN1O95832 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN1O95832 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN1O95832 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CLDN1O95832 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN1O95832 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CLDN1O95832 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.58■□□□□ 0.41
CLDN1O95832 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.58■□□□□ 0.41
CLDN1O95832 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CLDN1O95832 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN1O95832 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN1O95832 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN1O95832 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.58■□□□□ 0.4
CLDN1O95832 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.58■□□□□ 0.4
CLDN1O95832 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN1O95832 AL450487.1-201ENST00000426799 995 ntBASIC17.58■□□□□ 0.4
CLDN1O95832 AC117947.1-201ENST00000427448 529 ntBASIC17.58■□□□□ 0.4
CLDN1O95832 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.58■□□□□ 0.4
CLDN1O95832 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN1O95832 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN1O95832 EGLN1P1-201ENST00000531623 762 ntBASIC17.58■□□□□ 0.4
CLDN1O95832 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN1O95832 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN1O95832 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN1O95832 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLDN1O95832 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms