Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
GPC4O75487 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.71■□□□□ 0.75
GPC4O75487 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.71■□□□□ 0.75
GPC4O75487 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.71■□□□□ 0.75
GPC4O75487 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.71■□□□□ 0.75
GPC4O75487 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
GPC4O75487 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
GPC4O75487 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
GPC4O75487 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
GPC4O75487 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.7■□□□□ 0.74
GPC4O75487 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
GPC4O75487 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GPC4O75487 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.7■□□□□ 0.74
GPC4O75487 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.7■□□□□ 0.74
GPC4O75487 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.7■□□□□ 0.74
GPC4O75487 AC023632.3-201ENST00000521633 145 ntBASIC19.7■□□□□ 0.74
GPC4O75487 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.7■□□□□ 0.74
GPC4O75487 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.7■□□□□ 0.74
GPC4O75487 AC083880.1-201ENST00000608266 535 ntBASIC19.7■□□□□ 0.74
GPC4O75487 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
GPC4O75487 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.7■□□□□ 0.74
GPC4O75487 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.7■□□□□ 0.74
GPC4O75487 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.7■□□□□ 0.74
GPC4O75487 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
GPC4O75487 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
GPC4O75487 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.69■□□□□ 0.74
GPC4O75487 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
GPC4O75487 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
GPC4O75487 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
GPC4O75487 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.69■□□□□ 0.74
GPC4O75487 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC4O75487 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.69■□□□□ 0.74
GPC4O75487 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC4O75487 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC4O75487 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC4O75487 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.69■□□□□ 0.74
GPC4O75487 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC4O75487 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
GPC4O75487 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC4O75487 AC087289.5-201ENST00000586076 3175 ntBASIC19.69■□□□□ 0.74
GPC4O75487 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.69■□□□□ 0.74
GPC4O75487 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
GPC4O75487 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.69■□□□□ 0.74
GPC4O75487 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC4O75487 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
GPC4O75487 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
GPC4O75487 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.69■□□□□ 0.74
GPC4O75487 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 KRT8P17-201ENST00000453110 1448 ntBASIC19.68■□□□□ 0.74
GPC4O75487 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 AC120498.9-201ENST00000339021 3867 ntBASIC19.68■□□□□ 0.74
GPC4O75487 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.68■□□□□ 0.74
GPC4O75487 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.68■□□□□ 0.74
GPC4O75487 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.68■□□□□ 0.74
GPC4O75487 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.68■□□□□ 0.74
GPC4O75487 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.68■□□□□ 0.74
GPC4O75487 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
GPC4O75487 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.68■□□□□ 0.74
GPC4O75487 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GPC4O75487 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
GPC4O75487 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
GPC4O75487 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.68■□□□□ 0.74
GPC4O75487 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.68■□□□□ 0.74
GPC4O75487 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.67■□□□□ 0.74
GPC4O75487 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.67■□□□□ 0.74
GPC4O75487 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms