Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.54■□□□□ 0.88
LRCH4O75427 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.54■□□□□ 0.88
LRCH4O75427 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRCH4O75427 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH4O75427 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRCH4O75427 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH4O75427 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH4O75427 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH4O75427 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRCH4O75427 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRCH4O75427 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LRCH4O75427 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.53■□□□□ 0.88
LRCH4O75427 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LRCH4O75427 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LRCH4O75427 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.53■□□□□ 0.88
LRCH4O75427 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.53■□□□□ 0.88
LRCH4O75427 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.53■□□□□ 0.88
LRCH4O75427 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.53■□□□□ 0.88
LRCH4O75427 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.53■□□□□ 0.88
LRCH4O75427 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.53■□□□□ 0.88
LRCH4O75427 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
LRCH4O75427 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.53■□□□□ 0.88
LRCH4O75427 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.53■□□□□ 0.88
LRCH4O75427 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.53■□□□□ 0.88
LRCH4O75427 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LRCH4O75427 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRCH4O75427 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.53■□□□□ 0.88
LRCH4O75427 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.52■□□□□ 0.88
LRCH4O75427 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.52■□□□□ 0.88
LRCH4O75427 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.52■□□□□ 0.88
LRCH4O75427 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
LRCH4O75427 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.52■□□□□ 0.88
LRCH4O75427 SOX15-203ENST00000570788 1093 ntBASIC20.52■□□□□ 0.88
LRCH4O75427 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
LRCH4O75427 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LRCH4O75427 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
LRCH4O75427 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LRCH4O75427 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRCH4O75427 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRCH4O75427 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
LRCH4O75427 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRCH4O75427 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRCH4O75427 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRCH4O75427 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH4O75427 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRCH4O75427 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH4O75427 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH4O75427 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
LRCH4O75427 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
LRCH4O75427 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.51■□□□□ 0.87
LRCH4O75427 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.51■□□□□ 0.87
LRCH4O75427 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH4O75427 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH4O75427 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.51■□□□□ 0.87
LRCH4O75427 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH4O75427 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRCH4O75427 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.51■□□□□ 0.87
LRCH4O75427 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.51■□□□□ 0.87
LRCH4O75427 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.51■□□□□ 0.87
LRCH4O75427 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH4O75427 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.51■□□□□ 0.87
LRCH4O75427 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.51■□□□□ 0.87
LRCH4O75427 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRCH4O75427 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRCH4O75427 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRCH4O75427 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.51■□□□□ 0.87
LRCH4O75427 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH4O75427 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.5■□□□□ 0.87
LRCH4O75427 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH4O75427 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRCH4O75427 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.5■□□□□ 0.87
LRCH4O75427 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LRCH4O75427 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms