Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF11O60813 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF11O60813 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF11O60813 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF11O60813 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF11O60813 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF11O60813 YBX1P10-201ENST00000444752 975 ntBASIC20.05■□□□□ 0.8
PRAMEF11O60813 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRAMEF11O60813 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.05■□□□□ 0.8
PRAMEF11O60813 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF11O60813 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF11O60813 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF11O60813 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF11O60813 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF11O60813 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEF11O60813 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
PRAMEF11O60813 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEF11O60813 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF11O60813 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PRAMEF11O60813 AL359736.2-201ENST00000621992 437 ntBASIC20.04■□□□□ 0.8
PRAMEF11O60813 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.04■□□□□ 0.8
PRAMEF11O60813 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF11O60813 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF11O60813 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF11O60813 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRAMEF11O60813 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF11O60813 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.03■□□□□ 0.8
PRAMEF11O60813 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF11O60813 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 GCSHP5-201ENST00000443090 522 ntBASIC20.03■□□□□ 0.8
PRAMEF11O60813 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF11O60813 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.03■□□□□ 0.8
PRAMEF11O60813 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF11O60813 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRAMEF11O60813 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF11O60813 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF11O60813 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF11O60813 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF11O60813 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF11O60813 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF11O60813 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF11O60813 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF11O60813 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 AC142381.4-202ENST00000563973 229 ntBASIC20.02■□□□□ 0.8
PRAMEF11O60813 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 AC110285.5-201ENST00000611501 352 ntBASIC20.02■□□□□ 0.8
PRAMEF11O60813 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PRAMEF11O60813 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF11O60813 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PRAMEF11O60813 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF11O60813 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF11O60813 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PRAMEF11O60813 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.02■□□□□ 0.79
PRAMEF11O60813 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF11O60813 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PRAMEF11O60813 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
PRAMEF11O60813 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
PRAMEF11O60813 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF11O60813 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF11O60813 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF11O60813 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PRAMEF11O60813 KRT18P16-201ENST00000510337 1294 ntBASIC20.01■□□□□ 0.79
PRAMEF11O60813 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.01■□□□□ 0.79
PRAMEF11O60813 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms