Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
URB1O60287 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.64■□□□□ 0.57
URB1O60287 COX11P1-201ENST00000489116 835 ntBASIC18.64■□□□□ 0.57
URB1O60287 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.64■□□□□ 0.57
URB1O60287 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.64■□□□□ 0.57
URB1O60287 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.64■□□□□ 0.57
URB1O60287 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
URB1O60287 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
URB1O60287 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
URB1O60287 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
URB1O60287 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.64■□□□□ 0.57
URB1O60287 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
URB1O60287 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
URB1O60287 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
URB1O60287 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
URB1O60287 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
URB1O60287 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.63■□□□□ 0.57
URB1O60287 AC130371.2-201ENST00000619443 611 ntBASIC18.63■□□□□ 0.57
URB1O60287 AL691432.3-201ENST00000621860 400 ntBASIC18.63■□□□□ 0.57
URB1O60287 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
URB1O60287 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
URB1O60287 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
URB1O60287 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
URB1O60287 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
URB1O60287 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
URB1O60287 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
URB1O60287 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
URB1O60287 AC007663.1-201ENST00000438948 1240 ntBASIC18.63■□□□□ 0.57
URB1O60287 AL359075.1-203ENST00000462729 1002 ntBASIC18.63■□□□□ 0.57
URB1O60287 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.63■□□□□ 0.57
URB1O60287 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
URB1O60287 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
URB1O60287 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
URB1O60287 EP400NL-214ENST00000641289 2402 ntBASIC18.63■□□□□ 0.57
URB1O60287 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
URB1O60287 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
URB1O60287 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.62■□□□□ 0.57
URB1O60287 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.62■□□□□ 0.57
URB1O60287 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.62■□□□□ 0.57
URB1O60287 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
URB1O60287 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 AC023511.2-201ENST00000618803 211 ntBASIC18.62■□□□□ 0.57
URB1O60287 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
URB1O60287 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
URB1O60287 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
URB1O60287 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
URB1O60287 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
URB1O60287 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
URB1O60287 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.61■□□□□ 0.57
URB1O60287 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
URB1O60287 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.61■□□□□ 0.57
URB1O60287 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.61■□□□□ 0.57
URB1O60287 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
URB1O60287 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
URB1O60287 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.61■□□□□ 0.57
URB1O60287 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.61■□□□□ 0.57
URB1O60287 RN7SL510P-201ENST00000581311 263 ntBASIC18.61■□□□□ 0.57
URB1O60287 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.61■□□□□ 0.57
URB1O60287 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
URB1O60287 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
URB1O60287 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.6■□□□□ 0.57
URB1O60287 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.6■□□□□ 0.57
URB1O60287 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
URB1O60287 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
URB1O60287 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
URB1O60287 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.6■□□□□ 0.57
URB1O60287 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.6■□□□□ 0.57
URB1O60287 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.6■□□□□ 0.57
URB1O60287 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.6■□□□□ 0.57
URB1O60287 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.6■□□□□ 0.57
URB1O60287 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.6■□□□□ 0.57
URB1O60287 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
URB1O60287 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
URB1O60287 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.59■□□□□ 0.57
URB1O60287 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
URB1O60287 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
URB1O60287 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.59■□□□□ 0.57
URB1O60287 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms