Protein–RNA interactions for Protein: O43889

CREB3, Cyclic AMP-responsive element-binding protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3O43889 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3O43889 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3O43889 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3O43889 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.54■□□□□ 0.88
CREB3O43889 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3O43889 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CREB3O43889 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.54■□□□□ 0.88
CREB3O43889 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.54■□□□□ 0.88
CREB3O43889 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.54■□□□□ 0.88
CREB3O43889 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.54■□□□□ 0.88
CREB3O43889 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CREB3O43889 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3O43889 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3O43889 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CREB3O43889 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CREB3O43889 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.53■□□□□ 0.88
CREB3O43889 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3O43889 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3O43889 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3O43889 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.53■□□□□ 0.88
CREB3O43889 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.53■□□□□ 0.88
CREB3O43889 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3O43889 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.53■□□□□ 0.88
CREB3O43889 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.53■□□□□ 0.88
CREB3O43889 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.53■□□□□ 0.88
CREB3O43889 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
CREB3O43889 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.53■□□□□ 0.88
CREB3O43889 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.53■□□□□ 0.88
CREB3O43889 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3O43889 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3O43889 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CREB3O43889 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3O43889 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CREB3O43889 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3O43889 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CREB3O43889 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3O43889 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3O43889 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3O43889 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.52■□□□□ 0.88
CREB3O43889 UNC93B5-201ENST00000530315 699 ntBASIC20.52■□□□□ 0.88
CREB3O43889 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.52■□□□□ 0.88
CREB3O43889 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.52■□□□□ 0.88
CREB3O43889 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.52■□□□□ 0.88
CREB3O43889 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.52■□□□□ 0.88
CREB3O43889 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.52■□□□□ 0.88
CREB3O43889 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CREB3O43889 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CREB3O43889 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.52■□□□□ 0.88
CREB3O43889 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CREB3O43889 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.52■□□□□ 0.88
CREB3O43889 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
CREB3O43889 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.52■□□□□ 0.87
CREB3O43889 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
CREB3O43889 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CREB3O43889 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.52■□□□□ 0.87
CREB3O43889 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CREB3O43889 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.52■□□□□ 0.87
CREB3O43889 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CREB3O43889 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.51■□□□□ 0.87
CREB3O43889 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 RPS2P52-201ENST00000469610 820 ntBASIC20.51■□□□□ 0.87
CREB3O43889 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.51■□□□□ 0.87
CREB3O43889 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.51■□□□□ 0.87
CREB3O43889 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.51■□□□□ 0.87
CREB3O43889 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.51■□□□□ 0.87
CREB3O43889 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.51■□□□□ 0.87
CREB3O43889 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CREB3O43889 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.51■□□□□ 0.87
CREB3O43889 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.51■□□□□ 0.87
CREB3O43889 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CREB3O43889 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.5■□□□□ 0.87
CREB3O43889 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CREB3O43889 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CREB3O43889 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.5■□□□□ 0.87
CREB3O43889 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CREB3O43889 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.5■□□□□ 0.87
CREB3O43889 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CREB3O43889 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CREB3O43889 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CREB3O43889 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CREB3O43889 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CREB3O43889 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CREB3O43889 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CREB3O43889 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.5■□□□□ 0.87
CREB3O43889 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.5■□□□□ 0.87
CREB3O43889 UNC93B4-201ENST00000505679 747 ntBASIC20.5■□□□□ 0.87
CREB3O43889 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CREB3O43889 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.5■□□□□ 0.87
CREB3O43889 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CREB3O43889 AC008687.6-201ENST00000596318 630 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms