Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSNA1O43805 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SSNA1O43805 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSNA1O43805 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSNA1O43805 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSNA1O43805 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSNA1O43805 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SSNA1O43805 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSNA1O43805 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSNA1O43805 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSNA1O43805 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSNA1O43805 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.8■□□□□ 0.28
SSNA1O43805 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSNA1O43805 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC16.8■□□□□ 0.28
SSNA1O43805 AC010525.1-201ENST00000585559 441 ntBASIC16.8■□□□□ 0.28
SSNA1O43805 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SSNA1O43805 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SSNA1O43805 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSNA1O43805 BX119927.1-201ENST00000636596 1552 ntBASIC16.8■□□□□ 0.28
SSNA1O43805 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SSNA1O43805 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
SSNA1O43805 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SSNA1O43805 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SSNA1O43805 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.79■□□□□ 0.28
SSNA1O43805 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.79■□□□□ 0.28
SSNA1O43805 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.79■□□□□ 0.28
SSNA1O43805 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
SSNA1O43805 DPP3P2-201ENST00000416030 1696 ntBASIC16.79■□□□□ 0.28
SSNA1O43805 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.79■□□□□ 0.28
SSNA1O43805 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.79■□□□□ 0.28
SSNA1O43805 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.79■□□□□ 0.28
SSNA1O43805 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
SSNA1O43805 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.79■□□□□ 0.28
SSNA1O43805 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.79■□□□□ 0.28
SSNA1O43805 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SSNA1O43805 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SSNA1O43805 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SSNA1O43805 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.78■□□□□ 0.28
SSNA1O43805 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.78■□□□□ 0.28
SSNA1O43805 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.78■□□□□ 0.28
SSNA1O43805 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SSNA1O43805 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.78■□□□□ 0.28
SSNA1O43805 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.78■□□□□ 0.28
SSNA1O43805 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.77■□□□□ 0.28
SSNA1O43805 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSNA1O43805 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSNA1O43805 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SSNA1O43805 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSNA1O43805 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.77■□□□□ 0.28
SSNA1O43805 CROCCP1-201ENST00000426910 5675 ntBASIC16.77■□□□□ 0.28
SSNA1O43805 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SSNA1O43805 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSNA1O43805 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SSNA1O43805 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC16.77■□□□□ 0.28
SSNA1O43805 BX664725.1-201ENST00000438252 379 ntBASIC16.77■□□□□ 0.28
SSNA1O43805 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SSNA1O43805 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.77■□□□□ 0.28
SSNA1O43805 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.77■□□□□ 0.28
SSNA1O43805 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.77■□□□□ 0.27
SSNA1O43805 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.77■□□□□ 0.27
SSNA1O43805 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SSNA1O43805 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.77■□□□□ 0.27
SSNA1O43805 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSNA1O43805 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SSNA1O43805 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SSNA1O43805 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SSNA1O43805 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms