Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.97■□□□□ 0.79
SMAD6O43541 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SMAD6O43541 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 AL135905.2-201ENST00000584934 1404 ntBASIC19.97■□□□□ 0.79
SMAD6O43541 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
SMAD6O43541 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SMAD6O43541 AF186192.3-201ENST00000583427 947 ntBASIC19.97■□□□□ 0.79
SMAD6O43541 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.97■□□□□ 0.79
SMAD6O43541 AC113410.3-201ENST00000623366 203 ntBASIC19.97■□□□□ 0.79
SMAD6O43541 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.97■□□□□ 0.79
SMAD6O43541 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.97■□□□□ 0.79
SMAD6O43541 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.97■□□□□ 0.79
SMAD6O43541 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SMAD6O43541 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.97■□□□□ 0.79
SMAD6O43541 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.97■□□□□ 0.79
SMAD6O43541 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.97■□□□□ 0.79
SMAD6O43541 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
SMAD6O43541 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SMAD6O43541 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SMAD6O43541 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
SMAD6O43541 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 TCF3P1-201ENST00000423021 1937 ntBASIC19.96■□□□□ 0.79
SMAD6O43541 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.96■□□□□ 0.79
SMAD6O43541 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SMAD6O43541 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.96■□□□□ 0.79
SMAD6O43541 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 TSPY7P-201ENST00000431358 1114 ntBASIC19.96■□□□□ 0.79
SMAD6O43541 YBX1P10-201ENST00000444752 975 ntBASIC19.96■□□□□ 0.79
SMAD6O43541 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.96■□□□□ 0.79
SMAD6O43541 MIR4497-201ENST00000583208 89 ntBASIC19.96■□□□□ 0.79
SMAD6O43541 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.96■□□□□ 0.79
SMAD6O43541 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.96■□□□□ 0.79
SMAD6O43541 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SMAD6O43541 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SMAD6O43541 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SMAD6O43541 AP001271.2-201ENST00000624018 1556 ntBASIC19.95■□□□□ 0.78
SMAD6O43541 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SMAD6O43541 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.95■□□□□ 0.78
SMAD6O43541 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.95■□□□□ 0.78
SMAD6O43541 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SMAD6O43541 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.95■□□□□ 0.78
SMAD6O43541 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.95■□□□□ 0.78
SMAD6O43541 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.95■□□□□ 0.78
SMAD6O43541 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.95■□□□□ 0.78
SMAD6O43541 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.95■□□□□ 0.78
SMAD6O43541 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.95■□□□□ 0.78
SMAD6O43541 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.95■□□□□ 0.78
SMAD6O43541 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SMAD6O43541 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SMAD6O43541 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.94■□□□□ 0.78
SMAD6O43541 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.94■□□□□ 0.78
SMAD6O43541 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD6O43541 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.94■□□□□ 0.78
SMAD6O43541 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SMAD6O43541 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD6O43541 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.94■□□□□ 0.78
SMAD6O43541 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.94■□□□□ 0.78
SMAD6O43541 KRT18P16-201ENST00000510337 1294 ntBASIC19.94■□□□□ 0.78
SMAD6O43541 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD6O43541 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.94■□□□□ 0.78
SMAD6O43541 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SMAD6O43541 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD6O43541 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD6O43541 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD6O43541 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD6O43541 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD6O43541 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMAD6O43541 PCDHAC2-203ENST00000615316 3011 ntBASIC19.94■□□□□ 0.78
SMAD6O43541 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms