Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.16■□□□□ 0.98
HOXA2O43364 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HOXA2O43364 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 RCC2P6-201ENST00000526625 1557 ntBASIC21.15■□□□□ 0.98
HOXA2O43364 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXA2O43364 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HOXA2O43364 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 AC004951.3-201ENST00000418645 1148 ntBASIC21.15■□□□□ 0.98
HOXA2O43364 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
HOXA2O43364 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
HOXA2O43364 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXA2O43364 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.15■□□□□ 0.98
HOXA2O43364 SLC25A1P4-201ENST00000567977 778 ntBASIC21.15■□□□□ 0.98
HOXA2O43364 AC011298.2-201ENST00000617989 482 ntBASIC21.15■□□□□ 0.98
HOXA2O43364 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HOXA2O43364 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXA2O43364 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HOXA2O43364 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HOXA2O43364 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.15■□□□□ 0.98
HOXA2O43364 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HOXA2O43364 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.14■□□□□ 0.98
HOXA2O43364 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HOXA2O43364 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.98
HOXA2O43364 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA2O43364 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA2O43364 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA2O43364 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA2O43364 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.14■□□□□ 0.97
HOXA2O43364 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXA2O43364 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA2O43364 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA2O43364 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.14■□□□□ 0.97
HOXA2O43364 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXA2O43364 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.14■□□□□ 0.97
HOXA2O43364 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA2O43364 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
HOXA2O43364 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.14■□□□□ 0.97
HOXA2O43364 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA2O43364 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HOXA2O43364 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA2O43364 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA2O43364 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA2O43364 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXA2O43364 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HOXA2O43364 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.13■□□□□ 0.97
HOXA2O43364 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.13■□□□□ 0.97
HOXA2O43364 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.13■□□□□ 0.97
HOXA2O43364 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.13■□□□□ 0.97
HOXA2O43364 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.13■□□□□ 0.97
HOXA2O43364 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA2O43364 TMEM179-206ENST00000616017 1645 ntBASIC21.13■□□□□ 0.97
HOXA2O43364 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA2O43364 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA2O43364 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.13■□□□□ 0.97
HOXA2O43364 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA2O43364 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.13■□□□□ 0.97
HOXA2O43364 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA2O43364 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HOXA2O43364 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA2O43364 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA2O43364 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA2O43364 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HOXA2O43364 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
HOXA2O43364 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA2O43364 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA2O43364 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA2O43364 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
HOXA2O43364 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.12■□□□□ 0.97
HOXA2O43364 FAM207BP-201ENST00000447172 505 ntBASIC21.12■□□□□ 0.97
HOXA2O43364 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.12■□□□□ 0.97
HOXA2O43364 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.12■□□□□ 0.97
HOXA2O43364 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA2O43364 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
HOXA2O43364 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HOXA2O43364 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HOXA2O43364 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HOXA2O43364 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA2O43364 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
HOXA2O43364 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
HOXA2O43364 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HOXA2O43364 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HOXA2O43364 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA2O43364 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.11■□□□□ 0.97
HOXA2O43364 ECEL1P2-202ENST00000465689 757 ntBASIC21.11■□□□□ 0.97
HOXA2O43364 DUX4L26-201ENST00000489078 1255 ntBASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms