Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.02■□□□□ 0.8
RIPK2O43353 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.02■□□□□ 0.8
RIPK2O43353 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 UBE2DNL-204ENST00000602536 740 ntBASIC20.02■□□□□ 0.8
RIPK2O43353 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.02■□□□□ 0.8
RIPK2O43353 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.02■□□□□ 0.8
RIPK2O43353 AC005082.1-201ENST00000413042 2259 ntBASIC20.02■□□□□ 0.8
RIPK2O43353 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.02■□□□□ 0.8
RIPK2O43353 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RIPK2O43353 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RIPK2O43353 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.02■□□□□ 0.79
RIPK2O43353 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.01■□□□□ 0.79
RIPK2O43353 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RIPK2O43353 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.01■□□□□ 0.79
RIPK2O43353 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.01■□□□□ 0.79
RIPK2O43353 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.01■□□□□ 0.79
RIPK2O43353 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.01■□□□□ 0.79
RIPK2O43353 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.01■□□□□ 0.79
RIPK2O43353 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 AL591742.1-201ENST00000604433 565 ntBASIC20.01■□□□□ 0.79
RIPK2O43353 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.01■□□□□ 0.79
RIPK2O43353 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.01■□□□□ 0.79
RIPK2O43353 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RIPK2O43353 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20■□□□□ 0.79
RIPK2O43353 AL161938.1-201ENST00000569833 2180 ntBASIC20■□□□□ 0.79
RIPK2O43353 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20■□□□□ 0.79
RIPK2O43353 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
RIPK2O43353 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RIPK2O43353 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 LETM1P2-201ENST00000597330 2178 ntBASIC20■□□□□ 0.79
RIPK2O43353 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RIPK2O43353 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RIPK2O43353 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20■□□□□ 0.79
RIPK2O43353 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RIPK2O43353 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RIPK2O43353 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RIPK2O43353 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RIPK2O43353 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.99■□□□□ 0.79
RIPK2O43353 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 PHGDH-210ENST00000641115 1638 ntBASIC19.99■□□□□ 0.79
RIPK2O43353 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RIPK2O43353 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.99■□□□□ 0.79
RIPK2O43353 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RIPK2O43353 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RIPK2O43353 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RIPK2O43353 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RIPK2O43353 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RIPK2O43353 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RIPK2O43353 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms