Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 AC112907.3-201ENST00000577781 2400 ntBASIC18.21■□□□□ 0.51
ARHGEF9O43307 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 POU5F1P3-201ENST00000428824 1078 ntBASIC18.21■□□□□ 0.51
ARHGEF9O43307 CDV3P1-201ENST00000471403 739 ntBASIC18.21■□□□□ 0.51
ARHGEF9O43307 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF9O43307 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.21■□□□□ 0.51
ARHGEF9O43307 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.21■□□□□ 0.5
ARHGEF9O43307 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
ARHGEF9O43307 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
ARHGEF9O43307 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.2■□□□□ 0.5
ARHGEF9O43307 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.2■□□□□ 0.5
ARHGEF9O43307 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ARHGEF9O43307 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.2■□□□□ 0.5
ARHGEF9O43307 ITM2C-210ENST00000620962 501 ntBASIC18.2■□□□□ 0.5
ARHGEF9O43307 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.2■□□□□ 0.5
ARHGEF9O43307 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ARHGEF9O43307 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ARHGEF9O43307 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.2■□□□□ 0.5
ARHGEF9O43307 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ARHGEF9O43307 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.2■□□□□ 0.5
ARHGEF9O43307 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
ARHGEF9O43307 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ARHGEF9O43307 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.19■□□□□ 0.5
ARHGEF9O43307 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ARHGEF9O43307 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ARHGEF9O43307 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.19■□□□□ 0.5
ARHGEF9O43307 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ARHGEF9O43307 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ARHGEF9O43307 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ARHGEF9O43307 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ARHGEF9O43307 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ARHGEF9O43307 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms