Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 AC069544.1-201ENST00000609399 999 ntBASIC18.9■□□□□ 0.62
NDUFS4O43181 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFS4O43181 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFS4O43181 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.9■□□□□ 0.62
NDUFS4O43181 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFS4O43181 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFS4O43181 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
NDUFS4O43181 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFS4O43181 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NDUFS4O43181 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.9■□□□□ 0.62
NDUFS4O43181 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
NDUFS4O43181 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDUFS4O43181 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDUFS4O43181 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NDUFS4O43181 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDUFS4O43181 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.89■□□□□ 0.61
NDUFS4O43181 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NDUFS4O43181 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.89■□□□□ 0.61
NDUFS4O43181 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDUFS4O43181 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.89■□□□□ 0.61
NDUFS4O43181 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.89■□□□□ 0.61
NDUFS4O43181 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
NDUFS4O43181 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.89■□□□□ 0.61
NDUFS4O43181 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.89■□□□□ 0.61
NDUFS4O43181 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.89■□□□□ 0.61
NDUFS4O43181 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.88■□□□□ 0.61
NDUFS4O43181 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.88■□□□□ 0.61
NDUFS4O43181 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.88■□□□□ 0.61
NDUFS4O43181 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
NDUFS4O43181 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.88■□□□□ 0.61
NDUFS4O43181 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.88■□□□□ 0.61
NDUFS4O43181 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NDUFS4O43181 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
NDUFS4O43181 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.88■□□□□ 0.61
NDUFS4O43181 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.87■□□□□ 0.61
NDUFS4O43181 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.87■□□□□ 0.61
NDUFS4O43181 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.87■□□□□ 0.61
NDUFS4O43181 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.87■□□□□ 0.61
NDUFS4O43181 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NDUFS4O43181 AC233263.1-201ENST00000578059 224 ntBASIC18.87■□□□□ 0.61
NDUFS4O43181 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.87■□□□□ 0.61
NDUFS4O43181 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
NDUFS4O43181 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.86■□□□□ 0.61
NDUFS4O43181 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.86■□□□□ 0.61
NDUFS4O43181 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NDUFS4O43181 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
NDUFS4O43181 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.86■□□□□ 0.61
NDUFS4O43181 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.86■□□□□ 0.61
NDUFS4O43181 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.86■□□□□ 0.61
NDUFS4O43181 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
NDUFS4O43181 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.86■□□□□ 0.61
NDUFS4O43181 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.86■□□□□ 0.61
NDUFS4O43181 AL121829.2-201ENST00000620908 328 ntBASIC18.86■□□□□ 0.61
NDUFS4O43181 AC073648.6-201ENST00000641589 218 ntBASIC18.86■□□□□ 0.61
NDUFS4O43181 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.86■□□□□ 0.61
NDUFS4O43181 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NDUFS4O43181 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms