Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.86■□□□□ 0.45
SMAD9O15198 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.86■□□□□ 0.45
SMAD9O15198 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
SMAD9O15198 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD9O15198 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD9O15198 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.86■□□□□ 0.45
SMAD9O15198 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD9O15198 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.86■□□□□ 0.45
SMAD9O15198 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SMAD9O15198 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SMAD9O15198 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SMAD9O15198 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SMAD9O15198 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 ESRRAP1-201ENST00000400596 1257 ntBASIC17.85■□□□□ 0.45
SMAD9O15198 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD9O15198 AC026366.1-201ENST00000488803 879 ntBASIC17.85■□□□□ 0.45
SMAD9O15198 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SMAD9O15198 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD9O15198 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SMAD9O15198 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.85■□□□□ 0.45
SMAD9O15198 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SMAD9O15198 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.85■□□□□ 0.45
SMAD9O15198 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD9O15198 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.85■□□□□ 0.45
SMAD9O15198 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
SMAD9O15198 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.85■□□□□ 0.45
SMAD9O15198 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMAD9O15198 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.84■□□□□ 0.45
SMAD9O15198 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.84■□□□□ 0.45
SMAD9O15198 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.84■□□□□ 0.45
SMAD9O15198 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD9O15198 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.84■□□□□ 0.45
SMAD9O15198 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SMAD9O15198 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SMAD9O15198 BX119927.1-201ENST00000636596 1552 ntBASIC17.84■□□□□ 0.45
SMAD9O15198 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD9O15198 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD9O15198 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SMAD9O15198 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD9O15198 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SMAD9O15198 TSPY20P-201ENST00000450910 630 ntBASIC17.84■□□□□ 0.45
SMAD9O15198 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD9O15198 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SMAD9O15198 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.84■□□□□ 0.45
SMAD9O15198 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.84■□□□□ 0.45
SMAD9O15198 AC008687.6-201ENST00000596318 630 ntBASIC17.84■□□□□ 0.45
SMAD9O15198 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.84■□□□□ 0.45
SMAD9O15198 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.84■□□□□ 0.45
SMAD9O15198 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMAD9O15198 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SMAD9O15198 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.83■□□□□ 0.45
SMAD9O15198 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD9O15198 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD9O15198 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SMAD9O15198 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD9O15198 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD9O15198 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD9O15198 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
SMAD9O15198 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD9O15198 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD9O15198 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD9O15198 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.83■□□□□ 0.45
SMAD9O15198 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMAD9O15198 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SMAD9O15198 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD9O15198 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD9O15198 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.83■□□□□ 0.44
SMAD9O15198 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD9O15198 POU5F1P3-201ENST00000428824 1078 ntBASIC17.83■□□□□ 0.44
SMAD9O15198 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.83■□□□□ 0.44
SMAD9O15198 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.83■□□□□ 0.44
SMAD9O15198 AC087289.5-201ENST00000586076 3175 ntBASIC17.83■□□□□ 0.44
SMAD9O15198 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD9O15198 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.83■□□□□ 0.44
SMAD9O15198 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD9O15198 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD9O15198 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD9O15198 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SMAD9O15198 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD9O15198 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMAD9O15198 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.83■□□□□ 0.44
SMAD9O15198 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.82■□□□□ 0.44
SMAD9O15198 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SMAD9O15198 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMAD9O15198 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms