Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNPHO15079 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
SNPHO15079 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.56■□□□□ 0.56
SNPHO15079 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.56■□□□□ 0.56
SNPHO15079 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNPHO15079 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SNPHO15079 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.55■□□□□ 0.56
SNPHO15079 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
SNPHO15079 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.55■□□□□ 0.56
SNPHO15079 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SNPHO15079 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 AC006128.1-201ENST00000624704 1661 ntBASIC18.55■□□□□ 0.56
SNPHO15079 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.55■□□□□ 0.56
SNPHO15079 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.55■□□□□ 0.56
SNPHO15079 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.55■□□□□ 0.56
SNPHO15079 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.55■□□□□ 0.56
SNPHO15079 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.55■□□□□ 0.56
SNPHO15079 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SNPHO15079 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.55■□□□□ 0.56
SNPHO15079 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SNPHO15079 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SNPHO15079 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SNPHO15079 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.55■□□□□ 0.56
SNPHO15079 KRT8P36-201ENST00000489121 1440 ntBASIC18.55■□□□□ 0.56
SNPHO15079 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.55■□□□□ 0.56
SNPHO15079 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.55■□□□□ 0.56
SNPHO15079 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
SNPHO15079 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNPHO15079 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SNPHO15079 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SNPHO15079 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.54■□□□□ 0.56
SNPHO15079 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SNPHO15079 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SNPHO15079 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.54■□□□□ 0.56
SNPHO15079 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SNPHO15079 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.54■□□□□ 0.56
SNPHO15079 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.54■□□□□ 0.56
SNPHO15079 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SNPHO15079 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.54■□□□□ 0.56
SNPHO15079 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNPHO15079 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.54■□□□□ 0.56
SNPHO15079 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SNPHO15079 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.53■□□□□ 0.56
SNPHO15079 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SNPHO15079 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.53■□□□□ 0.56
SNPHO15079 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.53■□□□□ 0.56
SNPHO15079 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.53■□□□□ 0.56
SNPHO15079 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNPHO15079 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.53■□□□□ 0.56
SNPHO15079 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.53■□□□□ 0.56
SNPHO15079 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.53■□□□□ 0.56
SNPHO15079 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.53■□□□□ 0.56
SNPHO15079 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.53■□□□□ 0.56
SNPHO15079 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SNPHO15079 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 AP005212.1-201ENST00000581547 1997 ntBASIC18.53■□□□□ 0.56
SNPHO15079 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SNPHO15079 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SNPHO15079 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.53■□□□□ 0.56
SNPHO15079 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNPHO15079 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.53■□□□□ 0.56
SNPHO15079 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNPHO15079 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms