Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SEMA3EO15041 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SEMA3EO15041 AL512408.1-201ENST00000569378 2000 ntBASIC23.8■■□□□ 1.4
SEMA3EO15041 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.8■■□□□ 1.4
SEMA3EO15041 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC23.8■■□□□ 1.4
SEMA3EO15041 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.8■■□□□ 1.4
SEMA3EO15041 GLDC-219ENST00000640208 420 ntTSL 2 BASIC23.8■■□□□ 1.4
SEMA3EO15041 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SEMA3EO15041 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SEMA3EO15041 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
SEMA3EO15041 FSCN1P1-201ENST00000568912 1481 ntBASIC23.8■■□□□ 1.4
SEMA3EO15041 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SEMA3EO15041 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SEMA3EO15041 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.79■■□□□ 1.4
SEMA3EO15041 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC23.79■■□□□ 1.4
SEMA3EO15041 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SEMA3EO15041 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SEMA3EO15041 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SEMA3EO15041 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC23.79■■□□□ 1.4
SEMA3EO15041 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.79■■□□□ 1.4
SEMA3EO15041 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.79■■□□□ 1.4
SEMA3EO15041 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.79■■□□□ 1.4
SEMA3EO15041 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC23.79■■□□□ 1.4
SEMA3EO15041 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
SEMA3EO15041 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SEMA3EO15041 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SEMA3EO15041 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SEMA3EO15041 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SEMA3EO15041 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SEMA3EO15041 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SEMA3EO15041 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SEMA3EO15041 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.78■■□□□ 1.4
SEMA3EO15041 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.78■■□□□ 1.4
SEMA3EO15041 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
SEMA3EO15041 MESTP1-201ENST00000404287 994 ntBASIC23.78■■□□□ 1.4
SEMA3EO15041 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.78■■□□□ 1.4
SEMA3EO15041 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC23.78■■□□□ 1.4
SEMA3EO15041 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC23.78■■□□□ 1.4
SEMA3EO15041 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.78■■□□□ 1.4
SEMA3EO15041 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.78■■□□□ 1.4
SEMA3EO15041 AP000525.1-201ENST00000608286 694 ntBASIC23.78■■□□□ 1.4
SEMA3EO15041 AC131212.4-201ENST00000623606 975 ntBASIC23.78■■□□□ 1.4
SEMA3EO15041 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SEMA3EO15041 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC23.78■■□□□ 1.4
SEMA3EO15041 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SEMA3EO15041 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SEMA3EO15041 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SEMA3EO15041 KRT8P8-201ENST00000434750 1448 ntBASIC23.77■■□□□ 1.4
SEMA3EO15041 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SEMA3EO15041 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.77■■□□□ 1.4
SEMA3EO15041 FITM1-202ENST00000559294 800 ntBASIC23.77■■□□□ 1.4
SEMA3EO15041 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC23.77■■□□□ 1.4
SEMA3EO15041 HLA-A-209ENST00000638375 975 ntBASIC23.77■■□□□ 1.4
SEMA3EO15041 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SEMA3EO15041 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SEMA3EO15041 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SEMA3EO15041 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SEMA3EO15041 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SEMA3EO15041 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.77■■□□□ 1.4
SEMA3EO15041 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
SEMA3EO15041 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.77■■□□□ 1.4
SEMA3EO15041 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SEMA3EO15041 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SEMA3EO15041 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.76■■□□□ 1.39
SEMA3EO15041 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.76■■□□□ 1.39
SEMA3EO15041 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
SEMA3EO15041 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.76■■□□□ 1.39
SEMA3EO15041 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.76■■□□□ 1.39
SEMA3EO15041 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SEMA3EO15041 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC23.76■■□□□ 1.39
SEMA3EO15041 DGCR10-201ENST00000609839 495 ntBASIC23.76■■□□□ 1.39
SEMA3EO15041 MIR6786-201ENST00000616843 113 ntBASIC23.76■■□□□ 1.39
SEMA3EO15041 AC009237.14-201ENST00000609975 1594 ntBASIC23.76■■□□□ 1.39
SEMA3EO15041 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SEMA3EO15041 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms