Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.81■□□□□ 0.6
PCDH17O14917 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH17O14917 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH17O14917 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PCDH17O14917 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH17O14917 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.81■□□□□ 0.6
PCDH17O14917 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PCDH17O14917 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCDH17O14917 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PCDH17O14917 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH17O14917 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDH17O14917 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH17O14917 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH17O14917 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDH17O14917 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDH17O14917 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH17O14917 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDH17O14917 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.8■□□□□ 0.6
PCDH17O14917 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.8■□□□□ 0.6
PCDH17O14917 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.8■□□□□ 0.6
PCDH17O14917 AL359736.2-201ENST00000621992 437 ntBASIC18.8■□□□□ 0.6
PCDH17O14917 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.8■□□□□ 0.6
PCDH17O14917 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
PCDH17O14917 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCDH17O14917 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH17O14917 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
PCDH17O14917 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH17O14917 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH17O14917 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH17O14917 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH17O14917 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH17O14917 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH17O14917 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.79■□□□□ 0.6
PCDH17O14917 AC133681.1-201ENST00000465482 601 ntBASIC18.79■□□□□ 0.6
PCDH17O14917 RPS2P4-201ENST00000476944 856 ntBASIC18.79■□□□□ 0.6
PCDH17O14917 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH17O14917 RPPH1-201ENST00000516869 333 ntBASIC18.79■□□□□ 0.6
PCDH17O14917 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH17O14917 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.79■□□□□ 0.6
PCDH17O14917 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH17O14917 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCDH17O14917 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH17O14917 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH17O14917 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
PCDH17O14917 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH17O14917 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH17O14917 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCDH17O14917 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.79■□□□□ 0.6
PCDH17O14917 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PCDH17O14917 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDH17O14917 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PCDH17O14917 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
PCDH17O14917 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH17O14917 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDH17O14917 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDH17O14917 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDH17O14917 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.78■□□□□ 0.6
PCDH17O14917 PRKY-204ENST00000533551 1019 ntBASIC18.78■□□□□ 0.6
PCDH17O14917 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH17O14917 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCDH17O14917 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH17O14917 AL121829.2-201ENST00000620908 328 ntBASIC18.78■□□□□ 0.6
PCDH17O14917 FAM197Y4-202ENST00000622692 608 ntBASIC18.78■□□□□ 0.6
PCDH17O14917 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH17O14917 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH17O14917 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH17O14917 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms