Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPEO14579 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
COPEO14579 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.7■□□□□ 0.74
COPEO14579 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.7■□□□□ 0.74
COPEO14579 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPEO14579 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
COPEO14579 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPEO14579 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
COPEO14579 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
COPEO14579 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
COPEO14579 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COPEO14579 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.69■□□□□ 0.74
COPEO14579 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.69■□□□□ 0.74
COPEO14579 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COPEO14579 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COPEO14579 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.69■□□□□ 0.74
COPEO14579 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COPEO14579 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.69■□□□□ 0.74
COPEO14579 TERF1P5-201ENST00000477545 1207 ntBASIC19.69■□□□□ 0.74
COPEO14579 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.69■□□□□ 0.74
COPEO14579 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.69■□□□□ 0.74
COPEO14579 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.69■□□□□ 0.74
COPEO14579 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.69■□□□□ 0.74
COPEO14579 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COPEO14579 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
COPEO14579 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
COPEO14579 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
COPEO14579 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.69■□□□□ 0.74
COPEO14579 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
COPEO14579 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COPEO14579 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPEO14579 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.68■□□□□ 0.74
COPEO14579 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.68■□□□□ 0.74
COPEO14579 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.68■□□□□ 0.74
COPEO14579 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
COPEO14579 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COPEO14579 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPEO14579 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
COPEO14579 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.67■□□□□ 0.74
COPEO14579 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
COPEO14579 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.67■□□□□ 0.74
COPEO14579 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.67■□□□□ 0.74
COPEO14579 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.67■□□□□ 0.74
COPEO14579 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.67■□□□□ 0.74
COPEO14579 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.67■□□□□ 0.74
COPEO14579 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPEO14579 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPEO14579 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPEO14579 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
COPEO14579 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPEO14579 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms