Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXN3O00409 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXN3O00409 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXN3O00409 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXN3O00409 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXN3O00409 AC069152.1-201ENST00000438030 544 ntBASIC21.12■□□□□ 0.97
FOXN3O00409 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.12■□□□□ 0.97
FOXN3O00409 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.12■□□□□ 0.97
FOXN3O00409 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.12■□□□□ 0.97
FOXN3O00409 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXN3O00409 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXN3O00409 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
FOXN3O00409 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
FOXN3O00409 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXN3O00409 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXN3O00409 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
FOXN3O00409 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXN3O00409 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
FOXN3O00409 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXN3O00409 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXN3O00409 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXN3O00409 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXN3O00409 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXN3O00409 RPS2P52-201ENST00000469610 820 ntBASIC21.11■□□□□ 0.97
FOXN3O00409 PNMA6B-201ENST00000538162 1200 ntBASIC21.11■□□□□ 0.97
FOXN3O00409 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXN3O00409 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.11■□□□□ 0.97
FOXN3O00409 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXN3O00409 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXN3O00409 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXN3O00409 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
FOXN3O00409 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
FOXN3O00409 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXN3O00409 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
FOXN3O00409 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXN3O00409 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
FOXN3O00409 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.1■□□□□ 0.97
FOXN3O00409 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXN3O00409 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXN3O00409 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXN3O00409 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
FOXN3O00409 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXN3O00409 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXN3O00409 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXN3O00409 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXN3O00409 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXN3O00409 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
FOXN3O00409 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.1■□□□□ 0.97
FOXN3O00409 AC060766.5-201ENST00000590539 871 ntBASIC21.1■□□□□ 0.97
FOXN3O00409 AC005332.7-201ENST00000614046 2005 ntBASIC21.1■□□□□ 0.97
FOXN3O00409 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXN3O00409 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.1■□□□□ 0.97
FOXN3O00409 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXN3O00409 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
FOXN3O00409 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXN3O00409 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.09■□□□□ 0.97
FOXN3O00409 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN3O00409 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
FOXN3O00409 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN3O00409 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
FOXN3O00409 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN3O00409 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN3O00409 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FOXN3O00409 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN3O00409 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
FOXN3O00409 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FOXN3O00409 HLA-L-209ENST00000420110 1011 ntBASIC21.09■□□□□ 0.97
FOXN3O00409 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.09■□□□□ 0.97
FOXN3O00409 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.09■□□□□ 0.97
FOXN3O00409 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.09■□□□□ 0.97
FOXN3O00409 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.09■□□□□ 0.97
FOXN3O00409 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN3O00409 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
FOXN3O00409 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN3O00409 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
FOXN3O00409 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXN3O00409 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.08■□□□□ 0.97
FOXN3O00409 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN3O00409 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
FOXN3O00409 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN3O00409 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN3O00409 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC21.08■□□□□ 0.97
FOXN3O00409 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN3O00409 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXN3O00409 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.08■□□□□ 0.97
FOXN3O00409 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.08■□□□□ 0.97
FOXN3O00409 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms