Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.27■□□□□ 0.68
TAF4O00268 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.27■□□□□ 0.68
TAF4O00268 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.27■□□□□ 0.68
TAF4O00268 NAPSB-206ENST00000562112 1266 ntBASIC19.27■□□□□ 0.68
TAF4O00268 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.27■□□□□ 0.68
TAF4O00268 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.27■□□□□ 0.68
TAF4O00268 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.27■□□□□ 0.68
TAF4O00268 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TAF4O00268 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TAF4O00268 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
TAF4O00268 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TAF4O00268 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
TAF4O00268 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.27■□□□□ 0.67
TAF4O00268 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.26■□□□□ 0.67
TAF4O00268 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
TAF4O00268 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.26■□□□□ 0.67
TAF4O00268 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.26■□□□□ 0.67
TAF4O00268 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.26■□□□□ 0.67
TAF4O00268 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 AL390955.1-201ENST00000428694 934 ntBASIC19.26■□□□□ 0.67
TAF4O00268 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.26■□□□□ 0.67
TAF4O00268 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
TAF4O00268 AL031963.3-201ENST00000606441 850 ntBASIC19.26■□□□□ 0.67
TAF4O00268 AC006011.2-201ENST00000621313 1158 ntBASIC19.26■□□□□ 0.67
TAF4O00268 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.26■□□□□ 0.67
TAF4O00268 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
TAF4O00268 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.26■□□□□ 0.67
TAF4O00268 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 FEM1AP4-201ENST00000443167 1987 ntBASIC19.26■□□□□ 0.67
TAF4O00268 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.26■□□□□ 0.67
TAF4O00268 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.26■□□□□ 0.67
TAF4O00268 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TAF4O00268 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TAF4O00268 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
TAF4O00268 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.25■□□□□ 0.67
TAF4O00268 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.25■□□□□ 0.67
TAF4O00268 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.25■□□□□ 0.67
TAF4O00268 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
TAF4O00268 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.25■□□□□ 0.67
TAF4O00268 NUDT16P1-203ENST00000513809 620 ntBASIC19.25■□□□□ 0.67
TAF4O00268 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.25■□□□□ 0.67
TAF4O00268 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.25■□□□□ 0.67
TAF4O00268 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.25■□□□□ 0.67
TAF4O00268 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TAF4O00268 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TAF4O00268 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TAF4O00268 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.24■□□□□ 0.67
TAF4O00268 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.24■□□□□ 0.67
TAF4O00268 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.24■□□□□ 0.67
TAF4O00268 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.24■□□□□ 0.67
TAF4O00268 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 AC010203.1-204ENST00000548782 407 ntBASIC19.24■□□□□ 0.67
TAF4O00268 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TAF4O00268 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.24■□□□□ 0.67
TAF4O00268 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TAF4O00268 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TAF4O00268 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 Z98882.1-201ENST00000622160 2253 ntBASIC19.23■□□□□ 0.67
TAF4O00268 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.23■□□□□ 0.67
TAF4O00268 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.23■□□□□ 0.67
TAF4O00268 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.23■□□□□ 0.67
TAF4O00268 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
TAF4O00268 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TAF4O00268 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms