Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC10.99□□□□□ -0.65
CHKB-CPT1BH3BT56 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
CHKB-CPT1BH3BT56 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
CHKB-CPT1BH3BT56 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
CHKB-CPT1BH3BT56 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 MST1L-201ENST00000442552 2185 ntBASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 AC073314.1-201ENST00000568729 2216 ntBASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
CHKB-CPT1BH3BT56 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CHKB-CPT1BH3BT56 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
CHKB-CPT1BH3BT56 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms