Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 RARRES2P10-201ENST00000564312 460 ntBASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 AL121906.2-201ENST00000621597 723 ntBASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 AC073912.3-201ENST00000624414 853 ntBASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 SMG8-203ENST00000578922 2178 ntBASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.97■□□□□ 0.47
NPIPA3F8WFD2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 NBPF21P-201ENST00000425093 1451 ntBASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 KRT8P20-201ENST00000423953 1409 ntBASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.96■□□□□ 0.47
NPIPA3F8WFD2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.96■□□□□ 0.46
NPIPA3F8WFD2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 REXO1L12P-201ENST00000622156 912 ntBASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 AC113410.3-201ENST00000623366 203 ntBASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.95■□□□□ 0.46
NPIPA3F8WFD2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 PTBP1P-201ENST00000554374 1601 ntBASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
NPIPA3F8WFD2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms