Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM49D1C9J1S8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 MFSD11-216ENST00000590393 1141 ntBASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM49D1C9J1S8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 KRT18P68-201ENST00000392293 1000 ntBASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 LINC01465-201ENST00000408887 1940 ntBASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 PHGDH-210ENST00000641115 1638 ntBASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM49D1C9J1S8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 HLA-G-202ENST00000376815 851 ntBASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 HLA-G-203ENST00000376818 1127 ntBASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 KRT18P11-201ENST00000435214 1283 ntBASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM49D1C9J1S8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms