Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C4orf47A7E2U8 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.33■□□□□ 0.69
C4orf47A7E2U8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
C4orf47A7E2U8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C4orf47A7E2U8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C4orf47A7E2U8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 COX11P1-201ENST00000489116 835 ntBASIC19.33■□□□□ 0.68
C4orf47A7E2U8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
C4orf47A7E2U8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 IER3-202ENST00000376377 1350 ntBASIC19.32■□□□□ 0.68
C4orf47A7E2U8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 AP006587.1-201ENST00000534129 1502 ntBASIC19.32■□□□□ 0.68
C4orf47A7E2U8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 AC004980.1-204ENST00000429707 299 ntBASIC19.32■□□□□ 0.68
C4orf47A7E2U8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 FAM86EP-206ENST00000510506 987 ntBASIC19.32■□□□□ 0.68
C4orf47A7E2U8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 AC131212.4-201ENST00000623606 975 ntBASIC19.32■□□□□ 0.68
C4orf47A7E2U8 AC116562.4-202ENST00000641738 218 ntBASIC19.32■□□□□ 0.68
C4orf47A7E2U8 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C4orf47A7E2U8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 AL121956.5-201ENST00000625261 221 ntBASIC19.31■□□□□ 0.68
C4orf47A7E2U8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
C4orf47A7E2U8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 KRT8P20-201ENST00000423953 1409 ntBASIC19.3■□□□□ 0.68
C4orf47A7E2U8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
C4orf47A7E2U8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 HCG4P8-203ENST00000443049 980 ntBASIC19.29■□□□□ 0.68
C4orf47A7E2U8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
C4orf47A7E2U8 AC130371.2-201ENST00000619443 611 ntBASIC19.29■□□□□ 0.68
C4orf47A7E2U8 AC011558.1-201ENST00000623459 338 ntBASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms