Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TVP23AA6NH52 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
TVP23AA6NH52 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TVP23AA6NH52 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TVP23AA6NH52 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TVP23AA6NH52 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 C2orf69P4-201ENST00000565394 541 ntBASIC17.58■□□□□ 0.4
TVP23AA6NH52 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TVP23AA6NH52 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 AC005181.1-201ENST00000604782 1256 ntBASIC17.58■□□□□ 0.4
TVP23AA6NH52 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TVP23AA6NH52 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
TVP23AA6NH52 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TVP23AA6NH52 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.58■□□□□ 0.4
TVP23AA6NH52 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.57■□□□□ 0.4
TVP23AA6NH52 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TVP23AA6NH52 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 AC098818.2-201ENST00000564925 2320 ntBASIC17.57■□□□□ 0.4
TVP23AA6NH52 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TVP23AA6NH52 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.57■□□□□ 0.4
TVP23AA6NH52 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
TVP23AA6NH52 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TVP23AA6NH52 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.57■□□□□ 0.4
TVP23AA6NH52 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
TVP23AA6NH52 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TVP23AA6NH52 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.57■□□□□ 0.4
TVP23AA6NH52 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.56■□□□□ 0.4
TVP23AA6NH52 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.56■□□□□ 0.4
TVP23AA6NH52 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.56■□□□□ 0.4
TVP23AA6NH52 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TVP23AA6NH52 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 AC018445.3-201ENST00000624177 1945 ntBASIC17.56■□□□□ 0.4
TVP23AA6NH52 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TVP23AA6NH52 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TVP23AA6NH52 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.56■□□□□ 0.4
TVP23AA6NH52 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TVP23AA6NH52 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.55■□□□□ 0.4
TVP23AA6NH52 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.55■□□□□ 0.4
TVP23AA6NH52 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.55■□□□□ 0.4
TVP23AA6NH52 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 AP001271.2-201ENST00000624018 1556 ntBASIC17.55■□□□□ 0.4
TVP23AA6NH52 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
TVP23AA6NH52 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
TVP23AA6NH52 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TVP23AA6NH52 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TVP23AA6NH52 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms