Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RBFOX3A6NFN3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 AP005435.1-201ENST00000529293 1178 ntBASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 WIZP1-201ENST00000531444 2299 ntBASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RBFOX3A6NFN3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 AC009237.14-201ENST00000609975 1594 ntBASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 AC099791.2-201ENST00000605725 427 ntBASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 AC006333.2-201ENST00000607957 2099 ntBASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RBFOX3A6NFN3 HTR7P1-202ENST00000624664 4411 ntBASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RBFOX3A6NFN3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RBFOX3A6NFN3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms