Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.77■□□□□ 0.6
LRIT2A6NDA9 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.77■□□□□ 0.6
LRIT2A6NDA9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRIT2A6NDA9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRIT2A6NDA9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRIT2A6NDA9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRIT2A6NDA9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.77■□□□□ 0.59
LRIT2A6NDA9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRIT2A6NDA9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.77■□□□□ 0.59
LRIT2A6NDA9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
LRIT2A6NDA9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRIT2A6NDA9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 AC069544.1-201ENST00000609399 999 ntBASIC18.75■□□□□ 0.59
LRIT2A6NDA9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.75■□□□□ 0.59
LRIT2A6NDA9 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 POU5F1P3-201ENST00000428824 1078 ntBASIC18.74■□□□□ 0.59
LRIT2A6NDA9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 AC233263.1-201ENST00000578059 224 ntBASIC18.74■□□□□ 0.59
LRIT2A6NDA9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LRIT2A6NDA9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRIT2A6NDA9 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRIT2A6NDA9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LRIT2A6NDA9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LRIT2A6NDA9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.73■□□□□ 0.59
LRIT2A6NDA9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.73■□□□□ 0.59
LRIT2A6NDA9 RNF165-205ENST00000588679 2904 ntBASIC18.73■□□□□ 0.59
LRIT2A6NDA9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRIT2A6NDA9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.73■□□□□ 0.59
LRIT2A6NDA9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms