Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 BX119927.1-201ENST00000636596 1552 ntBASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGHV4-28A0A0C4DH34 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 PHGDH-210ENST00000641115 1638 ntBASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 AC004264.1-201ENST00000608354 794 ntBASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGHV4-28A0A0C4DH34 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 AC116351.2-201ENST00000606540 1585 ntBASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 F2R-202ENST00000505600 442 ntTSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 Z99916.2-201ENST00000604037 246 ntBASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 AL512408.1-201ENST00000569378 2000 ntBASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 AC018553.1-201ENST00000616682 1458 ntBASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 GABARAPL3-202ENST00000624044 1851 ntBASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
IGHV4-28A0A0C4DH34 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 AP006587.1-201ENST00000534129 1502 ntBASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 KRT16P5-201ENST00000455284 522 ntBASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.22□□□□□ -0.13
IGHV4-28A0A0C4DH34 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms