Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TRAV12-1A0A0B4J245 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 AC006333.2-201ENST00000607957 2099 ntBASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 POU5F1P4-201ENST00000413175 1085 ntBASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 TSPY9P-201ENST00000440215 945 ntBASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 TSPY11P-201ENST00000442607 1045 ntBASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV12-1A0A0B4J245 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV12-1A0A0B4J245 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.83□□□□□ -0.19
TRAV12-1A0A0B4J245 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
TRAV12-1A0A0B4J245 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV12-1A0A0B4J245 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV12-1A0A0B4J245 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV12-1A0A0B4J245 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV12-1A0A0B4J245 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV12-1A0A0B4J245 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 AC008175.2-201ENST00000612840 297 ntBASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 AC136469.2-201ENST00000623944 1028 ntBASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 MKRN4P-201ENST00000444706 1521 ntBASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 BCL2-203ENST00000589955 5011 ntBASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV12-1A0A0B4J245 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 WIZP1-201ENST00000531444 2299 ntBASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 PTCHD3P2-201ENST00000424937 1205 ntBASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
TRAV12-1A0A0B4J245 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms