Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 BCL2-203ENST00000589955 5011 ntBASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
IGKV2-28A0A075B6P5 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.02□□□□□ -0.32
IGKV2-28A0A075B6P5 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
IGKV2-28A0A075B6P5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC13.02□□□□□ -0.32
IGKV2-28A0A075B6P5 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
IGKV2-28A0A075B6P5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
IGKV2-28A0A075B6P5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
IGKV2-28A0A075B6P5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 AC142381.2-201ENST00000566120 298 ntBASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 RARRES2P11-201ENST00000635158 484 ntBASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 KRT87P-202ENST00000534226 1464 ntBASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.02□□□□□ -0.33
IGKV2-28A0A075B6P5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 HTR7P1-202ENST00000624664 4411 ntBASIC13.01□□□□□ -0.33
IGKV2-28A0A075B6P5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13□□□□□ -0.33
IGKV2-28A0A075B6P5 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms