Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 RN7SKP108-201ENST00000411367 328 ntBASIC6.11□□□□□ -1.43
C9orf72Q96LT7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 AL590399.4-201ENST00000436561 601 ntBASIC6.11□□□□□ -1.43
C9orf72Q96LT7 AMYP1-201ENST00000440059 1023 ntBASIC6.11□□□□□ -1.43
C9orf72Q96LT7 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 RPL34P33-201ENST00000486062 334 ntBASIC6.11□□□□□ -1.43
C9orf72Q96LT7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 AC009879.1-201ENST00000520029 839 ntBASIC6.11□□□□□ -1.43
C9orf72Q96LT7 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 AC091167.5-201ENST00000605689 894 ntBASIC6.11□□□□□ -1.43
C9orf72Q96LT7 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.11□□□□□ -1.43
C9orf72Q96LT7 MIR6861-201ENST00000618657 64 ntBASIC6.11□□□□□ -1.43
C9orf72Q96LT7 AC069542.2-201ENST00000624816 216 ntBASIC6.11□□□□□ -1.43
C9orf72Q96LT7 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.11□□□□□ -1.43
C9orf72Q96LT7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 THAP12P9-201ENST00000503971 2360 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC130304.1-201ENST00000622942 2385 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AP000432.2-201ENST00000624164 2048 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 OR10R3P-201ENST00000361688 942 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 RN7SKP128-201ENST00000364270 303 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 RNU105B-201ENST00000364478 208 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 MYL6P5-201ENST00000412707 459 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AL354868.1-201ENST00000417077 482 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC110602.1-201ENST00000437414 318 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 HMGN1P2-201ENST00000445197 310 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 RSU1P1-201ENST00000453416 441 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC009963.3-201ENST00000458090 486 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC021269.1-201ENST00000526860 705 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 MIR4701-201ENST00000583094 63 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC060780.2-201ENST00000589047 198 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AL080312.2-201ENST00000613001 630 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AL355974.3-201ENST00000617383 467 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AP001153.1-201ENST00000641024 338 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AL049634.1-201ENST00000453770 1720 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 CDY3P-201ENST00000454543 1618 ntBASIC6.1□□□□□ -1.43
C9orf72Q96LT7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.1□□□□□ -1.43
C9orf72Q96LT7 AC027279.4-201ENST00000624371 2072 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms